Palo Alto

$59+ Cheap flights from San Diego (SAN) to Palo Alto, CA

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 3/24. Fares are subject to change and may not be available on all flights or dates of travel.
SAN — SFO
Mar 13 — Mar 201
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Cheapflights Tip: The best prices from San Diego to Palo Alto are usually found in May or March, booked 63 days in advance, depart on a Friday or Thursday and return on a Tuesday

Cheap flight deals from San Diego to Palo Alto

Cheapest flights from San Diego to Palo Alto
Explore the most affordable flight options available from San Diego to Palo Alto. Find the lowest fares from popular airlines and budget airlines, with prices last updated on February 11, 2026.

This Kiwi.com deal was found by Cheapflights users on 2/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 4/2910:00 am
SAN
-
SFO
1 stop13h 25m
Frontier
Sun 5/310:03 am
SFO
-
SAN
Nonstop1h 38m
Frontier
Deal found 2/10$114
This Kiwi.com deal was found by Cheapflights users on 2/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 4/1712:36 pm
SAN
-
SFO
1 stop11h 46m
Frontier
Mon 4/2010:03 am
SFO
-
SAN
Nonstop1h 38m
Frontier
Deal found 2/10$115
This Super.com deal was found by Cheapflights users on 2/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Super.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 5/159:19 am
SAN
-
SFO
Nonstop1h 47m
Frontier
Sun 5/1710:03 am
SFO
-
SAN
Nonstop1h 38m
Frontier
Deal found 2/9$116
This Alaska Airlines deal was found by Cheapflights users on 2/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Alaska Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 3/1010:09 pm
SAN
-
SFO
Nonstop1h 50m
Alaska Airlines
Wed 3/116:40 am
SFO
-
SAN
Nonstop1h 38m
Alaska Airlines
Deal found 2/8$117
This Southwest deal was found by Cheapflights users on 2/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 3/184:55 pm
SAN
-
SFO
Nonstop1h 40m
Southwest
Wed 4/156:20 am
SFO
-
SAN
2 stops11h 25m
Southwest
Deal found 2/8$118
This CheapOair deal was found by Cheapflights users on 2/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure CheapOair is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 4/199:19 am
SAN
-
SFO
Nonstop1h 47m
Frontier
Sun 4/199:33 pm
SFO
-
SAN
1 stop20h 07m
Frontier
Deal found 2/10$119
This Kissandfly.com deal was found by Cheapflights users on 2/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kissandfly.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 3/76:15 am
SAN
-
SFO
Nonstop1h 50m
Alaska Airlines
Sun 3/86:40 am
SFO
-
SAN
Nonstop1h 38m
Alaska Airlines
Deal found 2/9$121
This Southwest deal was found by Cheapflights users on 2/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 3/32:00 pm
SAN
-
SFO
2 stops7h 20m
Southwest
Wed 3/45:30 am
SFO
-
SAN
1 stop6h 20m
Southwest
Deal found 2/9$122
This United Airlines deal was found by Cheapflights users on 2/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 3/146:15 am
SAN
-
SFO
Nonstop1h 50m
United Airlines
Sun 3/157:00 am
SFO
-
SAN
Nonstop1h 40m
United Airlines
Deal found 2/8$124
This Super.com deal was found by Cheapflights users on 2/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Super.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 4/179:19 am
SAN
-
SFO
Nonstop1h 47m
Frontier
Sun 4/1910:03 am
SFO
-
SAN
Nonstop1h 38m
Frontier
Deal found 2/10$125
This Trip.com deal was found by Cheapflights users on 2/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Trip.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 5/25:52 pm
SAN
-
SFO
Nonstop1h 46m
Multiple Airlines
Sun 5/310:03 am
SFO
-
SAN
Nonstop1h 38m
Multiple Airlines
Deal found 2/8$126

Find flight deals from San Diego to Palo Alto

Keep the following information in mind while searching for San Diego to Palo Alto flight deals. Data was last updated February 11, 2026.

Most accurate provider

FlightHub
3 stars

Most trusted provider

FlightHub
3 stars

Round-trip from

$114
(Kiwi.com)

One-way from

$59
(Southwest)

Popular in

November

Cheapest in

May

Average price

$168
Provider with most accurate pricing for San Diego-San Francisco flight deals.
Provider most trusted by Cheapflights users for San Diego-San Francisco flights.
From San Diego to Palo Alto
One-way flight from San Diego to Palo Alto
Highest demand for flights based on searches. 13% potential increase in price ($24 potential increase over avg. RT price).
Cheapest flight prices on average. 4% potential price decrease ($6 potential savings vs. average RT price).
Average for round-trip flights in February 2026

Cheapflights Fare Finder

 
Customize your flight search to find flights from San Diego to Palo Alto that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated February 11, 2026.
Use the filters below to find and compare flights from San Diego to Palo Alto that are best for you.

Fly from

San Diego

Fly to

Palo Alto

Route

Depart

Return

Price

San DiegoSan Francisco

SAN - SFO

SANSFO

San Diego

Tue 4/7

4:25 pm-10:45 pm

1 stop6h 20m

San Francisco

Wed 4/29

5:55 am-12:40 pm

2 stops6h 45m

$122

San DiegoSan Francisco

SAN - SFO

SANSFO

San Diego

Thu 3/5

6:15 am-8:05 am

Nonstop1h 50m

San Francisco

Mon 3/9

7:00 am-8:40 am

Nonstop1h 40m

$127

San DiegoSan Francisco

SAN - SFO

SANSFO

San Diego

Sat 4/25

6:36 am-8:24 am

Nonstop1h 48m

San Francisco

Sun 4/26

6:00 am-10:20 am

1 stop4h 20m

$127

San DiegoSan Francisco

SAN - SFO

SANSFO

San Diego

Tue 3/31

5:35 pm-11:15 pm

1 stop5h 40m

San Francisco

Tue 4/7

6:20 am-5:45 pm

2 stops11h 25m

$128

San DiegoSan Francisco

SAN - SFO

SANSFO

San Diego

Thu 3/19

6:15 am-8:05 am

Nonstop1h 50m

San Francisco

Sun 3/22

7:00 am-8:40 am

Nonstop1h 40m

$137

San DiegoSan Francisco

SAN - SFO

SANSFO

San Diego

Fri 4/17

8:45 pm-10:25 pm

Nonstop1h 40m

San Francisco

Mon 4/20

8:10 pm-9:45 pm

Nonstop1h 35m

$137

San DiegoSan Francisco

SAN - SFO

SANSFO

San Diego

Wed 4/1

4:21 pm-6:04 pm

Nonstop1h 43m

San Francisco

Sun 4/5

6:00 am-10:20 am

1 stop4h 20m

$137

San DiegoSan Francisco

SAN - SFO

SANSFO

San Diego

Sun 3/1

6:25 am-8:15 am

Nonstop1h 50m

San Francisco

Wed 3/4

5:30 am-11:50 am

1 stop6h 20m

$137

San DiegoSan Francisco

SAN - SFO

SANSFO

San Diego

Thu 3/12

8:55 pm-10:35 pm

Nonstop1h 40m

San Francisco

Sun 3/15

6:00 am-7:35 am

Nonstop1h 35m

$137

San DiegoSan Francisco

SAN - SFO

SANSFO

San Diego

Fri 3/13

10:09 pm-11:59 pm

Nonstop1h 50m

San Francisco

Mon 3/16

6:40 am-8:18 am

Nonstop1h 38m

$142

Flights are sorted by cheapest round-trip flights first.

Deals found on 2/9

Showing 1-10 of 24 results
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Best time to book a flight from San Diego to Palo Alto

Have a flexible travel schedule? Discover the best time to fly to Palo Alto from San Diego with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from San Diego to Palo Alto

How far ahead should I book a flight from San Diego to Palo Alto?

Use this chart to determine the optimal time to book a round-trip flight from San Diego to Palo Alto. Price data was last updated on February 6, 2026.

The best time to book flights from San Diego to Palo Alto is 63 days before your desired departure date. The cost of your flight will likely increase significantly if you book two weeks in advance of your flight.

What is the cheapest month to book a flight from San Diego to Palo Alto?

Currently, March is the cheapest month in which you can book a flight from San Diego to Palo Alto (average of $31). Flying from San Diego to Palo Alto in January is currently the most expensive (average of $100). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from SAN to P4L?

Find hourly flight availability from San Diego to Palo Alto. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated February 11, 2026.

It’s typically best to fly out from San Diego to Palo Alto in the afternoon. Doing so could potentially save you 30% on the flight price compared to flying in the morning, which is usually more expensive.

What is the cheapest day to fly from San Diego to Palo Alto?

Use this chart to determine the cheapest time to fly round-trip from San Diego to Palo Alto. Price data was last updated on February 7, 2026.

Travelers seeking maximum savings on their San Diego to Palo Alto flight should consider departing on Thursday at noon when fares are most often at their lowest. Sunday afternoons flights should be avoided if possible as fares are typically the most expensive at this time.

Reviews of airlines servicing Palo Alto

Get insights into the airlines that provide service to Palo Alto. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Palo Alto. Reviews last updated February 11, 2026.
Peruse reviews from past customers who have flown with Alaska Airlines, Southwest, and Hawaiian Airlines from San Diego to Palo Alto to help guide your decision. You can also see how each airline stacks up in terms of entertainment options, comfort, food, crew/service, and boarding process.

Crew

8.5

Comfort

7.8

Boarding

8.1

Entertainment

7.0

Food

7.1

Overall

8.0

Reviews

1 / 20
10.0
Excellent

Anonymous,Jan 2026

STS - LAX

Enjoyed staff assistance from ticking thru tsa , boarding and in the plane Couldn’t pick a seat except upgrading

Crew

8.5

Comfort

7.8

Boarding

8.1

Entertainment

7.0

Food

7.1

Overall

8.0

Reviews

1 / 20
10.0
Excellent

Anonymous,Jan 2026

STS - LAX

Enjoyed staff assistance from ticking thru tsa , boarding and in the plane Couldn’t pick a seat except upgrading

Crew

8.5

Comfort

7.8

Boarding

8.1

Entertainment

7.0

Food

7.1

Overall

8.0

Reviews

1 / 20
10.0
Excellent

Anonymous,Jan 2026

STS - LAX

Enjoyed staff assistance from ticking thru tsa , boarding and in the plane Couldn’t pick a seat except upgrading

Crew

8.5

Comfort

7.8

Boarding

8.1

Entertainment

7.0

Food

7.1

Overall

8.0

Reviews

1 / 20
10.0
Excellent

Anonymous,Jan 2026

STS - LAX

Enjoyed staff assistance from ticking thru tsa , boarding and in the plane Couldn’t pick a seat except upgrading

Crew

8.5

Comfort

7.8

Boarding

8.1

Entertainment

7.0

Food

7.1

Overall

8.0

Reviews

1 / 20
10.0
Excellent

Anonymous,Jan 2026

STS - LAX

Enjoyed staff assistance from ticking thru tsa , boarding and in the plane Couldn’t pick a seat except upgrading

Crew

8.5

Comfort

7.8

Boarding

8.1

Entertainment

7.0

Food

7.1

Overall

8.0

Reviews

1 / 20
10.0
Excellent

Anonymous,Jan 2026

STS - LAX

Enjoyed staff assistance from ticking thru tsa , boarding and in the plane Couldn’t pick a seat except upgrading

Related info for your journey

Find useful and relevant information for your journey from San Diego to Palo Alto. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.
  • What airport do you fly from for flights from San Diego to Palo Alto?

    Located just 2.6 mi from the city center, San Diego is the airport most travelers will use when flying to Palo Alto from San Diego. Booking flights from San Diego (SAN) to Palo Alto should be relatively easy as there are 47 daily outbound flights to Palo Alto from 9 different airlines.

  • How popular is this San Diego to Palo Alto flight route?

  • How long is the flight from San Diego to Palo Alto?

    There are many flights that can get you from San Diego to Palo Alto in 1h 50m. Fly via Southwest or United Airlines to get the fastest option. There are 446 mi between San Diego and Palo Alto. Both multi-stop and nonstop flights can be found to your destination and back.

  • What are the cheapest airlines to fly from San Diego to Palo Alto one-way?

    The cheapest airline one-way is Spirit Airlines, with whom users have recently found tickets for as low as $21. However, be on the lookout for offers from Hawaiian Airlines and Frontier, as they are both options that can get you from San Diego to Palo Alto for a low price.

  • What are the most reliable airlines from San Diego to Palo Alto?

    Looking for the most reliable airlines to get you to your destination on time? Our data shows these are most likely to get you from San Diego to Palo Alto on time: Emirates (86%), SWISS (85%), Virgin Australia (81%).

  • What are the cheapest flights from San Diego to Palo Alto?

    Looking at all options, your cheapest flight can be booked for $58. While the most popular route (San Diego - San Francisco) can be booked for $77 on average, our data indicates $709 when flying from San Diego to Palo Alto.

  • Can I find deals for flights from San Diego to Palo Alto that include hotel bookings?

    Yes. In addition to deals on San Diego to Palo Alto flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from San Diego to Palo Alto?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from San Diego to Palo Alto.

  • Can I find deals for business class flights from San Diego to Palo Alto?

    Yes. Cheapflights offers flight deals from San Diego to Palo Alto by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from San Diego to Palo Alto?

    Currently, March is the cheapest month in which you can book a flight from San Diego to Palo Alto (average of $31). Flying from San Diego to Palo Alto in January is currently the most expensive (average of $100). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

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Alternative routes for San Diego to Palo Alto

See prices for flight routes from nearby airports that may be better suited for you.

Top 9 airlines flying from San Diego to Palo Alto

Discover the top 9 airlines that operate flights from San Diego to Palo Alto. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated February 11, 2026.
AirlineCheapestAverageFlexibilityOn-time
Spirit AirlinesCheapest$22Average$93FlexibilityNo cancel feeOn-time65%
Hawaiian AirlinesCheapest$28Average$130FlexibilityNo cancel feeOn-time85%
FrontierCheapest$29Average$89FlexibilityNo cancel feeOn-time62%
United AirlinesCheapest$57Average$190FlexibilityNo cancel feeOn-time69%
Alaska AirlinesCheapest$58Average$184FlexibilityNo cancel feeOn-time75%
SouthwestCheapest$77Average$191FlexibilityNo cancel feeOn-time63%
DeltaCheapest$88Average$156FlexibilityNo cancel feeOn-timeN/A
JetBlueCheapest$116Average$195FlexibilityNo cancel feeOn-time62%
American AirlinesCheapest$197Average$361FlexibilityNo cancel feeOn-time71%

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