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$164+ Cheap flights from Puerto Rico to San Diego (SAN)

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 5/21. Fares are subject to change and may not be available on all flights or dates of travel.
SJU — SAN
May 5 — May 121
Mon 5/5
Mon 5/12
1 adult, Economy
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Cheap flight deals from Puerto Rico to San Diego

Keep the following information in mind while searching for Puerto Rico to San Diego flight deals. Data was last updated April 30, 2025.

Round-trip from

$266
(eDestinos)

One-way from

$164
(CheapOair)

Popular in

February

Cheapest in

August

Average price

$574
From Puerto Rico to San Diego
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One-way flight from Puerto Rico to San Diego
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Highest demand for flights based on searches. 2% potential increase in price ($13 potential increase over avg. RT price).
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Cheapest flight prices on average. 1% potential price decrease ($8 potential savings vs. average RT price).
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Average for round-trip flights in April 2025
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Find flight deals from Puerto Rico to San Diego

Cheapest flights from Puerto Rico to San Diego
Explore the most affordable flight options available from Puerto Rico to San Diego. Find the lowest fares from popular airlines and budget airlines, with prices last updated on April 30, 2025.

This eDestinos deal was found by Cheapflights users on 4/28. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure eDestinos is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 5/1012:36 pmSJU - SAN
2 stops14h 20mSpirit Airlines
Sun 5/186:58 pmSAN - SJU
2 stops13h 33mSpirit Airlines
Deal found 4/28$266
This Delta deal was found by Cheapflights users on 4/28. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 8/2112:56 pmSJU - SAN
1 stop11h 22mDelta
Thu 9/49:40 pmSAN - SJU
1 stop12h 49mDelta
Deal found 4/28$341
This Travelocity deal was found by Cheapflights users on 4/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Travelocity is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 5/3012:36 pmSJU - SAN
2 stops14h 20mMultiple Airlines
Sun 6/110:39 pmSAN - SJU
1 stop12h 21mMultiple Airlines
Deal found 4/27$363
This American Airlines deal was found by Cheapflights users on 4/28. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 8/218:00 amSJU - SAN
1 stop15h 13mAmerican Airlines
Thu 9/410:45 pmSAN - SJU
2 stops13h 02mAmerican Airlines
Deal found 4/28$372
This United Airlines deal was found by Cheapflights users on 4/28. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 8/201:05 amSJU - SAN
1 stop11h 31mUnited Airlines
Mon 8/2510:15 pmSAN - SJU
1 stop11h 19mUnited Airlines
Deal found 4/28$399
This JetBlue deal was found by Cheapflights users on 4/29. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure JetBlue is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 11/171:59 amSJU - SAN
1 stop11h 16mJetBlue
Tue 12/28:47 pmSAN - SJU
1 stop13h 43mJetBlue
Deal found 4/29$430
This Southwest deal was found by Cheapflights users on 4/28. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 9/311:50 amSJU - SAN
2 stops12h 10mSouthwest
Wed 9/107:45 amSAN - SJU
2 stops12h 00mSouthwest
Deal found 4/28$511
This United Airlines deal was found by Cheapflights users on 4/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 5/912:15 amBQN - SAN
1 stop12h 53mUnited Airlines
Sat 5/247:00 amSAN - BQN
1 stop13h 09mUnited Airlines
Deal found 4/27$615
This Alaska Airlines deal was found by Cheapflights users on 4/28. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Alaska Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 12/184:20 pmSJU - SAN
1 stop20h 01mAlaska Airlines
Mon 12/223:30 pmSAN - SJU
1 stop19h 18mAlaska Airlines
Deal found 4/28$655

Cheapflights Fare Finder

Customize your flight search to find flights from Puerto Rico to San Diego that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated April 30, 2025.
Use the filters below to find and compare flights from Puerto Rico to San Diego that are best for you.

Fly from

Puerto Rico

Fly to

San Diego

Route

Depart

Return

Price

San JuanSan Diego

SJU - SAN

SJUSAN

San Juan Luis Munoz Marin Intl

Sat 5/10

12:36 pm-11:56 pm

2 stops14h 20m

San Diego

Sun 5/18

6:58 pm-11:31 am

2 stops13h 33m

$266

San JuanSan Diego

SJU - SAN

SJUSAN

San Juan Luis Munoz Marin Intl

Thu 8/21

12:56 pm-9:18 pm

1 stop11h 22m

San Diego

Thu 9/4

9:40 pm-1:29 pm

1 stop12h 49m

$341

San JuanSan Diego

SJU - SAN

SJUSAN

San Juan Luis Munoz Marin Intl

Fri 5/30

12:36 pm-11:56 pm

2 stops14h 20m

San Diego

Sun 6/1

10:39 pm-2:00 pm

1 stop12h 21m

$363

San JuanSan Diego

SJU - SAN

SJUSAN

San Juan Luis Munoz Marin Intl

Thu 8/21

8:00 am-8:13 pm

1 stop15h 13m

San Diego

Thu 9/4

10:45 pm-2:47 pm

2 stops13h 02m

$372

San JuanSan Diego

SJU - SAN

SJUSAN

San Juan Luis Munoz Marin Intl

Wed 8/20

1:05 am-9:36 am

1 stop11h 31m

San Diego

Mon 8/25

10:15 pm-12:34 pm

1 stop11h 19m

$399

San JuanSan Diego

SJU - SAN

SJUSAN

San Juan Luis Munoz Marin Intl

Sat 5/17

8:00 am-7:15 pm

1 stop14h 15m

San Diego

Sun 6/8

8:25 pm-11:01 am

1 stop11h 36m

$430

San JuanSan Diego

SJU - SAN

SJUSAN

San Juan Luis Munoz Marin Intl

Wed 9/3

11:50 am-9:00 pm

2 stops12h 10m

San Diego

Wed 9/10

7:45 am-10:45 pm

2 stops12h 00m

$511

San JuanSan Diego

SJU - SAN

SJUSAN

San Juan Luis Munoz Marin Intl

Tue 7/22

12:59 am-9:50 am

1 stop11h 51m

San Diego

Mon 7/28

8:25 am-5:06 am

2 stops17h 41m

$925

San JuanSan Diego

SJU - SAN

SJUSAN

San Juan Luis Munoz Marin Intl

Wed 5/21

1:33 am-7:53 pm

2 stops21h 20m

$164

San JuanSan Diego

SJU - SAN

SJUSAN

San Juan Luis Munoz Marin Intl

Thu 6/5

7:30 am-7:15 pm

1 stop14h 45m

$171

Flights are sorted by cheapest round-trip flights first.

Deals found on 4/28

Showing 1-10 of 16 results
1
2

Best time to book a flight from Puerto Rico to San Diego

Have a flexible travel schedule? Discover the best time to fly to San Diego from Puerto Rico with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Puerto Rico to San Diego

What is the cheapest month to book a flight from Puerto Rico to San Diego?

Currently, August is the cheapest month in which you can book a flight from Puerto Rico to San Diego (average of $286). Flying from Puerto Rico to San Diego in March is currently the most expensive (average of $366). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from PR to SAN?

Find hourly flight availability from Puerto Rico to San Diego. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated April 30, 2025.

When flying from Puerto Rico to San Diego, the time of day you decide to fly out makes little to no difference towards the overall price you’ll pay on tickets.

Rainfall in San Diego by month

Plan your trip to San Diego by taking into account the average rainfall totals by month.

In terms of precipitation, rainfall in San Diego ranges from 0.0 - 2.3 inches per month. February is typically the wettest month, when rainfall can reach 2.3 in. July is typically the driest time to visit San Diego when rainfall is around 0.0 in.

Temperature in San Diego by month

Plan your trip to San Diego by taking into account the average temperature totals by month.

If weather is an important factor for your trip to San Diego, use this chart to help with planning. For those seeking warmer temperatures, August is the ideal time of year to visit, when temperatures reach an average of 71.6 F. Travelers looking to avoid the cold should look outside of January, when temperatures are typically at their lowest (around 57.2 F).

Reviews of airlines servicing San Diego

Get insights into the airlines that provide service to San Diego. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to San Diego. Reviews last updated April 30, 2025.
Alaska Airlines
8.0
Very good
9,961 reviews

Entertainment

7.1

Comfort

7.9

Crew

8.5

Overall

8.0

Boarding

8.2

Food

7.1

Reviews

1 / 20
10.0
Excellent

James,Apr 2025

LAX - SFO

Good flight except the uncontrollable cold air from the ceiling.
Alaska Airlines
8.0
Very good
9,961 reviews
Alaska Airlines
8.0
Very good
9,961 reviews

Entertainment

7.1

Comfort

7.9

Crew

8.5

Overall

8.0

Boarding

8.2

Food

7.1

Reviews

1 / 20
10.0
Excellent

James,Apr 2025

LAX - SFO

Good flight except the uncontrollable cold air from the ceiling.
Delta
8.0
Very good
7,929 reviews
Alaska Airlines
8.0
Very good
9,961 reviews

Entertainment

7.1

Comfort

7.9

Crew

8.5

Overall

8.0

Boarding

8.2

Food

7.1

Reviews

1 / 20
10.0
Excellent

James,Apr 2025

LAX - SFO

Good flight except the uncontrollable cold air from the ceiling.
United Airlines
7.4
Good
8,696 reviews
Alaska Airlines
8.0
Very good
9,961 reviews

Entertainment

7.1

Comfort

7.9

Crew

8.5

Overall

8.0

Boarding

8.2

Food

7.1

Reviews

1 / 20
10.0
Excellent

James,Apr 2025

LAX - SFO

Good flight except the uncontrollable cold air from the ceiling.
JetBlue
7.3
Good
2,922 reviews
Alaska Airlines
8.0
Very good
9,961 reviews

Entertainment

7.1

Comfort

7.9

Crew

8.5

Overall

8.0

Boarding

8.2

Food

7.1

Reviews

1 / 20
10.0
Excellent

James,Apr 2025

LAX - SFO

Good flight except the uncontrollable cold air from the ceiling.
American Airlines
7.2
Good
10,000 reviews
Alaska Airlines
8.0
Very good
9,961 reviews

Entertainment

7.1

Comfort

7.9

Crew

8.5

Overall

8.0

Boarding

8.2

Food

7.1

Reviews

1 / 20
10.0
Excellent

James,Apr 2025

LAX - SFO

Good flight except the uncontrollable cold air from the ceiling.

Related info for your journey

Find useful and relevant information for your journey from Puerto Rico to San Diego. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly into for flights to San Diego from Puerto Rico?

    San Diego (SAN), located 2.6 mi from the city center, is the airport you fly into when you book flights from Puerto Rico to San Diego.

  • What are the cheapest airlines to fly from Puerto Rico to San Diego one-way?

    To fly one-way, consider booking your trip with Spirit Airlines, which is currently one of the cheapest options available, starting at $164. JetBlue flights start at $171 while deals on Delta start at $176 one-way.

  • What are the most popular routes from Puerto Rico to San Diego?

    The most popular route from Puerto Rico to San Diego is San Juan Luis Munoz Marin Intl - San Diego. You may also consider Aguadilla Borinquen - San Diego or Culebra - San Diego.

  • Can I find deals for flights from Puerto Rico to San Diego that include hotel bookings?

    Yes. In addition to deals on Puerto Rico to San Diego flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Puerto Rico to San Diego?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Puerto Rico to San Diego.

  • Can I find deals for business class flights from Puerto Rico to San Diego?

    Yes. Cheapflights offers flight deals from Puerto Rico to San Diego by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Puerto Rico to San Diego?

    Currently, August is the cheapest month in which you can book a flight from Puerto Rico to San Diego (average of $286). Flying from Puerto Rico to San Diego in March is currently the most expensive (average of $366). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Traveling to a place near Puerto Rico?

Book flights to Puerto Rico if you plan to visit one of these locations
El Cajon
Chula Vista
Lemon Grove
National City
Imperial Beach
La Mesa
Alpine
Poway
Santee
Coronado

Browse thousands of different options on Cheapflights for your next trip

Toggle through the tabs below to find thousands of options on Cheapflights for your next trip.

Alternative routes for Puerto Rico to San Diego

See prices for flight routes from nearby airports that may be better suited for you.
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Top 6 airlines flying from Puerto Rico to San Diego

Discover the top 6 airlines that operate flights from Puerto Rico to San Diego. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated April 30, 2025.
AirlineCheapestAverageFlexibilityOn-time
FrontierCheapest$168Average$374FlexibilityNo cancel feeOn-time62%
JetBlueCheapest$303Average$457FlexibilityNo cancel feeOn-time62%
American AirlinesCheapest$310Average$516FlexibilityNo cancel feeOn-time71%
United AirlinesCheapest$315Average$491FlexibilityNo cancel feeOn-time69%
DeltaCheapest$386Average$570FlexibilityNo cancel feeOn-timeN/A
Alaska AirlinesCheapest$464Average$574FlexibilityNo cancel feeOn-time75%

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