$131+ Cheap flights from San Diego (SAN) to Puerto Rico
This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 10/1. Fares are subject to change and may not be available on all flights or dates of travel.
SAN — SJU
Jul 11 — Jul 181
Round-trip
1 adult, Economy
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Enter your travel information like dates, passengers, trip type (one-way or round trip), and preferred cabin class then click “Find deals”2. Select your favorite providers
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Cheapest flights from San Diego to Puerto RicoExplore the most affordable flight options available from San Diego to Puerto Rico. Find the lowest fares from popular airlines and budget airlines, with prices last updated on June 11, 2026.
Explore the most affordable flight options available from San Diego to Puerto Rico. Find the lowest fares from popular airlines and budget airlines, with prices last updated on June 11, 2026.
This American Airlines deal was found by Cheapflights users on 6/7. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 10/1710:45 pm
SAN
- SJU
1 stop12h 00m
American Airlines
Sat 10/246:00 am
SJU
- SAN
1 stop17h 39m
American Airlines
Deal found 6/7![American Airlines logo]()
$383
This Southwest deal was found by Cheapflights users on 6/6. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 8/108:40 am
SAN
- SJU
1 stop11h 25m
Southwest
Wed 8/1911:50 am
SJU
- SAN
1 stop10h 00m
Southwest
Deal found 6/6![Southwest logo]()
$386
This American Airlines deal was found by Cheapflights users on 6/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 8/1412:32 pm
SAN
- SJU
1 stop18h 11m
American Airlines
Mon 8/177:24 pm
SJU
- SAN
1 stop19h 08m
American Airlines
Deal found 6/9![American Airlines logo]()
$387
This American Airlines deal was found by Cheapflights users on 6/7. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 8/196:25 am
SAN
- SJU
2 stops12h 30m
American Airlines
Mon 8/247:00 am
SJU
- SAN
1 stop16h 35m
American Airlines
Deal found 6/7![American Airlines logo]()
$391
This American Airlines deal was found by Cheapflights users on 6/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 12/14:44 pm
SAN
- SJU
1 stop18h 02m
American Airlines
Tue 12/88:18 am
SJU
- SAN
1 stop16h 39m
American Airlines
Deal found 6/10![American Airlines logo]()
$392
This Delta deal was found by Cheapflights users on 6/6. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 9/1810:20 pm
SAN
- SJU
1 stop11h 40m
Delta
Fri 9/2512:58 pm
SJU
- SAN
2 stops13h 54m
Delta
Deal found 6/6![Delta logo]()
$396
This Southwest deal was found by Cheapflights users on 6/6. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 11/126:30 am
SAN
- SJU
1 stop14h 35m
Southwest
Mon 11/165:45 am
SJU
- SAN
2 stops11h 45m
Southwest
Deal found 6/6![Southwest logo]()
$410
This American Airlines deal was found by Cheapflights users on 6/6. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 8/316:15 am
SAN
- SJU
1 stop14h 00m
American Airlines
Fri 9/46:00 am
SJU
- SAN
1 stop19h 49m
American Airlines
Deal found 6/6![American Airlines logo]()
$411
This Southwest deal was found by Cheapflights users on 6/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 8/167:55 pm
SAN
- SJU
2 stops12h 00m
Southwest
Sun 8/239:25 pm
SJU
- SAN
2 stops16h 35m
Southwest
Deal found 6/11![Southwest logo]()
$415
This American Airlines deal was found by Cheapflights users on 6/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 9/29:48 am
SAN
- SJU
1 stop10h 27m
American Airlines
Sat 9/57:20 pm
SJU
- SAN
1 stop19h 12m
American Airlines
Deal found 6/8![American Airlines logo]()
$416
This American Airlines deal was found by Cheapflights users on 6/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 8/167:15 pm
SAN
- SJU
2 stops11h 28m
American Airlines
Sat 8/226:00 am
SJU
- SAN
2 stops12h 26m
American Airlines
Deal found 6/8![American Airlines logo]()
$417
This United Airlines deal was found by Cheapflights users on 6/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 7/106:35 am
SAN
- BQN
2 stops13h 34m
United Airlines
Thu 7/1612:15 am
BQN
- SAN
1 stop12h 06m
United Airlines
Deal found 6/8![United Airlines logo]()
$668
Best flights from San Diego to Puerto RicoDiscover carefully curated flight deals from San Diego to Puerto Rico that have cost, travel time, and layovers in mind to ensure you get the best travel experience. Data last updated June 11, 2026.
Discover carefully curated flight deals from San Diego to Puerto Rico that have cost, travel time, and layovers in mind to ensure you get the best travel experience. Data last updated June 11, 2026.
This Southwest deal was found by Cheapflights users on 6/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 8/78:40 am
SAN
- SJU
1 stop11h 25m
Southwest
Sat 8/155:05 am
SJU
- SAN
1 stop9h 05m
Southwest
Deal found 6/9![Southwest logo]()
$426
This Delta deal was found by Cheapflights users on 6/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 7/66:09 pm
SAN
- SJU
2 stops16h 23m
Delta
Mon 7/132:21 pm
SJU
- SAN
1 stop10h 40m
Delta
Deal found 6/8![Delta logo]()
$621
This United Airlines deal was found by Cheapflights users on 6/7. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 6/185:15 pm
SAN
- SJU
1 stop9h 14m
United Airlines
Mon 6/292:05 am
SJU
- SAN
1 stop11h 46m
United Airlines
Deal found 6/7![United Airlines logo]()
$630
This United deal was found by Cheapflights users on 6/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 8/249:45 pm
SAN
- CPX
2 stops36h 01m
Multiple Airlines
Thu 8/2710:42 am
CPX
- SAN
2 stops13h 43m
Multiple Airlines
Deal found 6/9![Multiple Airlines logo]()
$779
This Southwest deal was found by Cheapflights users on 6/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 7/299:00 am
SAN
- SJU
1 stop11h 50m
Southwest
Wed 8/1210:30 am
SJU
- SAN
1 stop11h 20m
Southwest
Deal found 6/9![Southwest logo]()
$454
This Southwest deal was found by Cheapflights users on 6/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 7/38:05 pm
SAN
- SJU
2 stops11h 40m
Southwest
Thu 7/910:20 am
SJU
- SAN
1 stop16h 05m
Southwest
Deal found 6/9![Southwest logo]()
$590
This United Airlines deal was found by Cheapflights users on 6/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 7/106:40 am
SAN
- BQN
1 stop13h 29m
United Airlines
Thu 7/1612:15 am
BQN
- SAN
1 stop12h 06m
United Airlines
Deal found 6/8![United Airlines logo]()
$668
This Delta deal was found by Cheapflights users on 6/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 7/169:30 pm
SAN
- SJU
1 stop13h 02m
Delta
Fri 7/242:42 pm
SJU
- SAN
1 stop9h 34m
Delta
Deal found 6/10![Delta logo]()
$681
This United Airlines deal was found by Cheapflights users on 6/6. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 8/246:18 am
SAN
- BQN
2 stops13h 51m
United Airlines
Tue 8/2512:15 am
BQN
- SAN
2 stops16h 02m
United Airlines
Deal found 6/6![United Airlines logo]()
$691
This Southwest deal was found by Cheapflights users on 6/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 7/266:20 am
SAN
- SJU
1 stop14h 35m
Southwest
Mon 8/35:00 am
SJU
- SAN
2 stops10h 45m
Southwest
Deal found 6/9![Southwest logo]()
$636
This Delta deal was found by Cheapflights users on 6/7. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 7/206:10 pm
SAN
- SJU
2 stops16h 22m
Delta
Tue 7/2812:50 pm
SJU
- SAN
2 stops14h 00m
Delta
Deal found 6/7![Delta logo]()
$727
This United Airlines deal was found by Cheapflights users on 6/6. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 6/303:10 pm
SAN
- SJU
1 stop11h 19m
United Airlines
Wed 7/12:55 pm
SJU
- SAN
1 stop9h 29m
United Airlines
Deal found 6/6![United Airlines logo]()
$701
This Southwest deal was found by Cheapflights users on 6/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 6/249:00 am
SAN
- SJU
1 stop11h 45m
Southwest
Sat 6/276:00 am
SJU
- SAN
2 stops12h 30m
Southwest
Deal found 6/10![Southwest logo]()
$691
This United Airlines deal was found by Cheapflights users on 6/5. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 8/256:35 am
SAN
- BQN
1 stop13h 34m
United Airlines
Wed 8/2612:15 am
BQN
- SAN
1 stop12h 34m
United Airlines
Deal found 6/5![United Airlines logo]()
$906
This United Airlines deal was found by Cheapflights users on 6/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 7/26:55 pm
SAN
- BQN
2 stops25h 14m
United Airlines
Sun 7/512:15 am
BQN
- SAN
1 stop26h 25m
United Airlines
Deal found 6/8![United Airlines logo]()
$916
This United Airlines deal was found by Cheapflights users on 6/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 6/156:40 am
SAN
- BQN
1 stop13h 29m
United Airlines
Sat 6/2012:15 am
BQN
- SAN
2 stops36h 13m
United Airlines
Deal found 6/9![United Airlines logo]()
$975
This United Airlines deal was found by Cheapflights users on 6/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 6/255:15 pm
SAN
- BQN
2 stops26h 54m
United Airlines
Sun 6/2812:15 am
BQN
- SAN
2 stops23h 08m
United Airlines
Deal found 6/10![United Airlines logo]()
$1,340
This United Airlines deal was found by Cheapflights users on 6/6. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 7/910:30 pm
SAN
- CPX
2 stops15h 51m
United Airlines
Sun 7/1210:48 am
CPX
- SAN
2 stops15h 52m
United Airlines
Deal found 6/6![United Airlines logo]()
$1,558
This United Airlines deal was found by Cheapflights users on 6/6. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 7/310:30 pm
SAN
- CPX
2 stops15h 51m
United Airlines
Tue 7/1410:48 am
CPX
- SAN
2 stops13h 36m
United Airlines
Deal found 6/6![United Airlines logo]()
$1,558
This United Airlines deal was found by Cheapflights users on 6/6. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 7/67:41 pm
SAN
- CPX
3 stops18h 40m
United Airlines
Fri 7/1010:48 am
CPX
- SAN
2 stops14h 37m
United Airlines
Deal found 6/6![United Airlines logo]()
$1,558
This United Airlines deal was found by Cheapflights users on 6/7. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 8/317:41 pm
SAN
- CPX
3 stops18h 40m
United Airlines
Wed 9/210:48 am
CPX
- SAN
2 stops13h 37m
United Airlines
Deal found 6/7![United Airlines logo]()
$1,727
Last-minute flights from San Diego to Puerto RicoDiscover last-minute flight deals from San Diego to Puerto Rico. Data last updated June 11, 2026 and is based on user searches.
Discover last-minute flight deals from San Diego to Puerto Rico. Data last updated June 11, 2026 and is based on user searches.
This United Airlines deal was found by Cheapflights users on 6/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 6/126:40 am
SAN
- BQN
1 stop13h 29m
United Airlines
Sat 6/1312:15 am
BQN
- SAN
1 stop12h 06m
United Airlines
Deal found 6/9![United Airlines logo]()
$746
This United Airlines deal was found by Cheapflights users on 6/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 7/26:55 pm
SAN
- BQN
2 stops25h 14m
United Airlines
Sun 7/512:15 am
BQN
- SAN
1 stop26h 25m
United Airlines
Deal found 6/8![United Airlines logo]()
$916
This American Airlines deal was found by Cheapflights users on 6/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 7/49:21 am
SAN
- SJU
1 stop10h 36m
American Airlines
Wed 7/87:14 pm
SJU
- SAN
1 stop18h 58m
American Airlines
Deal found 6/8![American Airlines logo]()
$479
This American Airlines deal was found by Cheapflights users on 6/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 7/56:50 am
SAN
- SJU
1 stop13h 09m
American Airlines
Tue 8/2512:55 am
SJU
- SAN
1 stop11h 03m
American Airlines
Deal found 6/10![American Airlines logo]()
$472
This United Airlines deal was found by Cheapflights users on 6/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 7/106:35 am
SAN
- BQN
2 stops13h 34m
United Airlines
Thu 7/1612:15 am
BQN
- SAN
1 stop12h 06m
United Airlines
Deal found 6/8![United Airlines logo]()
$668
This American Airlines deal was found by Cheapflights users on 6/7. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 7/209:55 pm
SAN
- SJU
1 stop12h 38m
American Airlines
Tue 7/285:45 am
SJU
- SAN
1 stop16h 35m
American Airlines
Deal found 6/7![American Airlines logo]()
$485
This American Airlines deal was found by Cheapflights users on 6/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 7/296:20 am
SAN
- SJU
1 stop14h 30m
American Airlines
Wed 8/127:00 am
SJU
- SAN
1 stop15h 15m
American Airlines
Deal found 6/10![American Airlines logo]()
$452
This Southwest deal was found by Cheapflights users on 6/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 7/299:00 am
SAN
- SJU
1 stop11h 50m
Southwest
Fri 8/145:30 am
SJU
- SAN
2 stops15h 40m
Southwest
Deal found 6/9![Southwest logo]()
$454
This Southwest deal was found by Cheapflights users on 6/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 7/299:00 am
SAN
- SJU
1 stop11h 50m
Southwest
Wed 8/1211:50 am
SJU
- SAN
2 stops11h 55m
Southwest
Deal found 6/9![Southwest logo]()
$494
This Delta deal was found by Cheapflights users on 6/6. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 7/309:30 pm
SAN
- SJU
1 stop13h 02m
Delta
Thu 8/612:56 pm
SJU
- SAN
1 stop11h 02m
Delta
Deal found 6/6![Delta logo]()
$396
This Southwest deal was found by Cheapflights users on 6/6. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 7/3011:15 am
SAN
- SJU
1 stop10h 05m
Southwest
Thu 8/68:55 pm
SJU
- SAN
2 stops17h 05m
Southwest
Deal found 6/6![Southwest logo]()
$431
This Southwest deal was found by Cheapflights users on 6/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 7/306:20 am
SAN
- SJU
1 stop15h 15m
Southwest
Fri 8/145:30 am
SJU
- SAN
2 stops15h 40m
Southwest
Deal found 6/9![Southwest logo]()
$476
One-way flights from San Diego to Puerto RicoSearch for one-way flight options from San Diego to Puerto Rico. Find affordable one-way fares based on user searches. Data last updated June 11, 2026.
Search for one-way flight options from San Diego to Puerto Rico. Find affordable one-way fares based on user searches. Data last updated June 11, 2026.
This United Airlines deal was found by Cheapflights users on 6/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 10/110:20 pm
SAN
- SJU
1 stop10h 37m
United Airlines
Deal found 6/10![United Airlines logo]()
$131
This United Airlines deal was found by Cheapflights users on 6/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 8/147:41 pm
SAN
- SJU
2 stops17h 01m
United Airlines
Deal found 6/9![United Airlines logo]()
$176
This United Airlines deal was found by Cheapflights users on 6/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 8/86:15 am
SAN
- SJU
1 stop11h 23m
United Airlines
Deal found 6/10![United Airlines logo]()
$186
This American Airlines deal was found by Cheapflights users on 6/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 8/116:19 am
SAN
- SJU
2 stops12h 36m
American Airlines
Deal found 6/8![American Airlines logo]()
$193
This American Airlines deal was found by Cheapflights users on 6/6. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 10/310:46 pm
SAN
- SJU
2 stops12h 08m
American Airlines
Deal found 6/6![American Airlines logo]()
$197
This United Airlines deal was found by Cheapflights users on 6/7. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 6/285:30 pm
SAN
- SJU
1 stop8h 59m
United Airlines
Deal found 6/7![United Airlines logo]()
$198
This Delta deal was found by Cheapflights users on 6/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 7/276:10 pm
SAN
- SJU
2 stops16h 22m
Delta
Deal found 6/9![Delta logo]()
$199
This SmartFares deal was found by Cheapflights users on 6/6. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure SmartFares is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 10/39:30 pm
SAN
- SJU
1 stop13h 04m
JetBlue
Deal found 6/6![JetBlue logo]()
$203
This Southwest deal was found by Cheapflights users on 6/7. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 8/209:25 am
SAN
- SJU
2 stops11h 25m
Southwest
Deal found 6/7![Southwest logo]()
$217
This American Airlines deal was found by Cheapflights users on 6/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 7/76:15 am
SAN
- SJU
1 stop14h 33m
American Airlines
Deal found 6/8![American Airlines logo]()
$218
This American Airlines deal was found by Cheapflights users on 6/7. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 8/59:40 am
SAN
- SJU
2 stops11h 19m
American Airlines
Deal found 6/7![American Airlines logo]()
$227
Find flight deals from San Diego to Puerto Rico
Keep the following information in mind while searching for San Diego to Puerto Rico flight deals. Data was last updated June 11, 2026.
Round-trip from | $383 (American Airlines) |
|---|---|
One-way from | $131 (United Airlines) |
Popular in | December |
Cheapest in | May |
Average price | $532 |
Cheapflights Fare Finder
Customize your flight search to find flights from San Diego to Puerto Rico that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated June 11, 2026.
Use the filters below to find and compare flights from San Diego to Puerto Rico that are best for you.
Fly from
Fly to
Route
Depart
Return
Cheapest round-trip
Quickest round-trip
San DiegoSan Juan
SAN - SJU
SANSJU
San Diego
Fri 8/7
8:40 am-11:05 pm
1 stop11h 25m
San Juan Luis Munoz Marin Intl
Sat 8/15
5:05 am-11:10 am
1 stop9h 05m
$426
San DiegoSan Juan
SAN - SJU
SANSJU
San Diego
Wed 7/29
9:00 am-11:50 pm
1 stop11h 50m
San Juan Luis Munoz Marin Intl
Wed 8/12
10:30 am-6:50 pm
1 stop11h 20m
$454
San DiegoSan Juan
SAN - SJU
SANSJU
San Diego
Fri 7/3
8:05 pm-10:45 am
2 stops11h 40m
San Juan Luis Munoz Marin Intl
Thu 7/9
10:20 am-11:25 pm
1 stop16h 05m
$590
San DiegoSan Juan
SAN - SJU
SANSJU
San Diego
Mon 7/6
6:09 pm-1:32 pm
2 stops16h 23m
San Juan Luis Munoz Marin Intl
Mon 7/13
2:21 pm-10:01 pm
1 stop10h 40m
$621
San DiegoSan Juan
SAN - SJU
SANSJU
San Diego
Thu 6/18
5:15 pm-5:29 am
1 stop9h 14m
San Juan Luis Munoz Marin Intl
Mon 6/29
2:05 am-10:51 am
1 stop11h 46m
$630
San DiegoSan Juan
SAN - SJU
SANSJU
San Diego
Sun 7/26
6:20 am-11:55 pm
1 stop14h 35m
San Juan Luis Munoz Marin Intl
Mon 8/3
5:00 am-12:45 pm
2 stops10h 45m
$636
San DiegoAguadilla
SAN - BQN
SANBQN
San Diego
Fri 7/10
6:40 am-11:09 pm
1 stop13h 29m
Aguadilla Borinquen
Thu 7/16
12:15 am-9:21 am
1 stop12h 06m
$668
San DiegoSan Juan
SAN - SJU
SANSJU
San Diego
Thu 7/16
9:30 pm-1:32 pm
1 stop13h 02m
San Juan Luis Munoz Marin Intl
Fri 7/24
2:42 pm-9:16 pm
1 stop9h 34m
$681
San DiegoAguadilla
SAN - BQN
SANBQN
San Diego
Mon 8/24
6:18 am-11:09 pm
2 stops13h 51m
Aguadilla Borinquen
Tue 8/25
12:15 am-1:17 pm
2 stops16h 02m
$691
San DiegoSan Juan
SAN - SJU
SANSJU
San Diego
Wed 6/24
9:00 am-11:45 pm
1 stop11h 45m
San Juan Luis Munoz Marin Intl
Sat 6/27
6:00 am-3:30 pm
2 stops12h 30m
$691
Showing 1-10 of 35 resultsSorted by cheapest first
Best time to book a flight from San Diego to Puerto Rico
Have a flexible travel schedule? Discover the best time to fly to Puerto Rico from San Diego with our price prediction graph.
SAN-SJU
SAN-CPX
SAN-BQN
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.
Cheapflights Insights
Everything you need to know about your flight from San Diego to Puerto Rico
SAN-PR0
SAN-SJU
SAN-CPX
SAN-BQN
What is the cheapest month to book a flight from San Diego to Puerto Rico?
Currently, September is the cheapest month in which you can book a flight from San Diego to Puerto Rico (average of $141). Flying from San Diego to Puerto Rico in February is currently the most expensive (average of $273). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.
How far ahead should I book a flight from San Diego to Puerto Rico?
The price you pay for your flight from San Diego to Puerto Rico may vary depending on when you book. For the best chance of a lower fare, look to book 62 days in advance of your trip. Fares are likely to increase a fortnight or so before your departure date.
Reviews of airlines servicing Puerto Rico
Get insights into the airlines that provide service to Puerto Rico. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Puerto Rico. Reviews last updated June 11, 2026.
Read reviews from past customers who have flown Alaska Airlines,Southwest, andDelta from San Diego to Puerto Rico. Users can see the overall rating for each airline as well as how each is rated in terms of entertainment options, comfort, food, crew/service, and boarding process.
Entertainment
7.0
Food
7.0
Boarding
8.1
Overall
7.9
Crew
8.5
Comfort
7.8
Reviews
1 / 20
10.0
ExcellentFranzi,Mar 2026
SFO - PDX
Entertainment
7.0
Food
7.0
Boarding
8.1
Overall
7.9
Crew
8.5
Comfort
7.8
Reviews
1 / 20
10.0
ExcellentFranzi,Mar 2026
SFO - PDX
Entertainment
7.0
Food
7.0
Boarding
8.1
Overall
7.9
Crew
8.5
Comfort
7.8
Reviews
1 / 20
10.0
ExcellentFranzi,Mar 2026
SFO - PDX
Entertainment
7.0
Food
7.0
Boarding
8.1
Overall
7.9
Crew
8.5
Comfort
7.8
Reviews
1 / 20
10.0
ExcellentFranzi,Mar 2026
SFO - PDX
Entertainment
7.0
Food
7.0
Boarding
8.1
Overall
7.9
Crew
8.5
Comfort
7.8
Reviews
1 / 20
10.0
ExcellentFranzi,Mar 2026
SFO - PDX
Entertainment
7.0
Food
7.0
Boarding
8.1
Overall
7.9
Crew
8.5
Comfort
7.8
Reviews
1 / 20
10.0
ExcellentFranzi,Mar 2026
SFO - PDX
Related info for your journey
Find useful and relevant information for your journey from San Diego to Puerto Rico. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.
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Alternative routes for San Diego to Puerto Rico
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Complete your trip
Complete your trip to Puerto Rico by adding a car rental and/or hotel reservation to your travel itinerary.
Search flights from San Diego to Puerto Rico by cabin class
Find flights from San Diego to Puerto Rico, based on your preferred cabin class, be it economy, premium economy, business, or first class.
San Diego and Puerto Rico flights
Browse other San Diego and Puerto Rico flight options. Last updated on June 11, 2026.
Popular flight searches
Check out other popular destinations found by fellow travelers in 2026
San Diego to Puerto Rico flights
Consider these flights traveling from San Diego to Puerto Rico.
Top 7 airlines flying from San Diego to Puerto Rico
Discover the top 7 airlines that operate flights from San Diego to Puerto Rico. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated June 11, 2026.
| Airline | Cheapest | Average | Flexibility | On-time |
|---|---|---|---|---|
| Cheapest$138 | Average$460 | FlexibilityNo cancel fee | On-time62% | |
| Cheapest$158 | Average$416 | FlexibilityNo cancel fee | On-timeN/A | |
| Cheapest$182 | Average$565 | FlexibilityNo cancel fee | On-time69% | |
| Cheapest$214 | Average$565 | FlexibilityNo cancel fee | On-time62% | |
| Cheapest$295 | Average$517 | FlexibilityNo cancel fee | On-time71% | |
| Cheapest$380 | Average$554 | FlexibilityNo cancel fee | On-time63% | |
| Cheapest$426 | Average$595 | FlexibilityNo cancel fee | On-time75% |