Japan

$98+ Cheap flights from Manila (MNL) to Japan

MNL — FUK
Nov 25 — Dec 21
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Cheap flight deals from Manila to Japan

Cheapest flights from Manila to Japan

Wed 12/26:15 pm -
1 stop12h 45m
Mon 12/72:05 pm -
Nonstop5h 00m
Deal found 10/26$271
Thu 12/37:45 am -
Nonstop3h 50m
Mon 12/72:05 pm -
Nonstop5h 00m
Deal found 10/23$276
Tue 12/87:45 am -
Nonstop3h 50m
Tue 12/152:05 pm -
Nonstop5h 00m
Deal found 10/24$289
Mon 12/72:40 am -
Nonstop3h 40m
Tue 12/159:55 pm -
Nonstop4h 45m
Deal found 10/24$293
Wed 12/1612:50 am -
Nonstop4h 20m
Sun 1/107:00 pm -
Nonstop5h 30m
Deal found 10/23$295
Tue 12/17:45 am -
Nonstop3h 50m
Fri 12/42:05 pm -
Nonstop5h 00m
Deal found 10/26$295
Mon 11/3012:50 am -
Nonstop4h 20m
Sun 12/137:00 pm -
Nonstop5h 30m
Deal found 10/21$303
Sun 11/12:40 am -
Nonstop3h 40m
Wed 11/119:55 pm -
Nonstop4h 45m
Deal found 10/22$305
Mon 11/302:40 am -
Nonstop3h 40m
Thu 12/109:55 pm -
Nonstop4h 45m
Deal found 10/24$306
Wed 12/92:20 pm -
Nonstop3h 40m
Sat 12/128:00 pm -
Nonstop4h 15m
Deal found 10/24$307
Thu 12/107:45 am -
Nonstop3h 50m
Thu 12/172:05 pm -
Nonstop5h 00m
Deal found 10/26$314
Fri 11/62:40 am -
Nonstop3h 40m
Wed 11/119:55 pm -
Nonstop4h 45m
Deal found 10/25$323

Find flight deals from Manila to Japan

Most accurate provider

FlightHub
3 stars

Most trusted provider

FlightHub
3 stars

Round-trip from

$241
(FlightHub)

One-way from

$98
(Kiwi.com)

Popular in

December

Cheapest in

February

Average price

$319

Good round-trip deal

$247 or less

Good one-way deal

$133 or less
Provider with most accurate pricing for Manila Ninoy Aquino Intl-Tokyo (TYO) flight deals.
Provider most trusted by Cheapflights users for Manila Ninoy Aquino Intl-Tokyo (TYO) flights.
From Manila Ninoy Aquino Intl to Japan
One-way flight from Manila Ninoy Aquino Intl to Japan
Highest demand for flights based on searches. 4% potential increase in price ($14 potential increase over avg. RT price).
Cheapest flight prices on average. 2% potential price decrease ($7 potential savings vs. average RT price).
Average for round-trip flights in October 2026
Price to beat on a round-trip flight from Manila Ninoy Aquino Intl to Japan.
Price to beat on a one-way flight from Manila Ninoy Aquino Intl to Japan.

Cheapflights Fare Finder

 
Use the filters below to find and compare flights from Manila to Japan that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

Cheapest round-trip
Quickest round-trip

ManilaFukuoka

MNL Manila Ninoy Aquino Intl - FUK Fukuoka

MNLFUK

Manila Ninoy Aquino Intl

Tue 12/15

2:20 pm-7:00 pm

Nonstop3h 40m

Fukuoka

Wed 12/31

12:00 am-11:00 pm

Nonstop0h 00m

$137

ManilaNagoya

MNL Manila Ninoy Aquino Intl - NGO Nagoya Chubu Centrair Intl

MNLNGO

Manila Ninoy Aquino Intl

Sun 1/24

7:45 am-12:35 pm

Nonstop3h 50m

Nagoya Chubu Centrair Intl

Wed 12/31

12:00 am-11:00 pm

Nonstop0h 00m

$139

ManilaSapporo

MNL Manila Ninoy Aquino Intl - CTS Sapporo Chitose

MNLCTS

Manila Ninoy Aquino Intl

Thu 3/11

12:50 am-3:45 pm

1 stop13h 55m

Sapporo Chitose

Wed 12/31

12:00 am-11:00 pm

Nonstop0h 00m

$142

ManilaTokyo

MNL Manila Ninoy Aquino Intl - HND Tokyo Haneda

MNLHND

Manila Ninoy Aquino Intl

Mon 2/1

7:10 pm-12:15 am

Nonstop4h 05m

Tokyo Haneda

Wed 12/31

12:00 am-11:00 pm

Nonstop0h 00m

$148

ManilaOsaka

MNL Manila Ninoy Aquino Intl - KIX Osaka Kansai Intl

MNLKIX

Manila Ninoy Aquino Intl

Thu 12/10

2:40 am-7:20 am

Nonstop3h 40m

Osaka Kansai Intl

Wed 12/31

12:00 am-11:00 pm

Nonstop0h 00m

$151

ManilaFukuoka

MNL Manila Ninoy Aquino Intl - FUK Fukuoka

MNLFUK

Manila Ninoy Aquino Intl

Sat 1/16

2:20 pm-7:00 pm

Nonstop3h 40m

Fukuoka

Wed 12/31

12:00 am-11:00 pm

Nonstop0h 00m

$160

ManilaFukuoka

MNL Manila Ninoy Aquino Intl - FUK Fukuoka

MNLFUK

Manila Ninoy Aquino Intl

Sun 3/7

12:50 am-5:55 pm

1 stop16h 05m

Fukuoka

Wed 12/31

12:00 am-11:00 pm

Nonstop0h 00m

$161

ManilaOkinawa

MNL Manila Ninoy Aquino Intl - OKA Okinawa Naha

MNLOKA

Manila Ninoy Aquino Intl

Sun 1/31

7:45 am-6:10 pm

1 stop9h 25m

Okinawa Naha

Wed 12/31

12:00 am-11:00 pm

Nonstop0h 00m

$168

ManilaSapporo

MNL Manila Ninoy Aquino Intl - CTS Sapporo Chitose

MNLCTS

Manila Ninoy Aquino Intl

Wed 12/16

12:50 am-11:20 am

1 stop9h 30m

Sapporo Chitose

Wed 12/31

12:00 am-11:00 pm

Nonstop0h 00m

$175

ManilaTokyo

MNL Manila Ninoy Aquino Intl - HND Tokyo Haneda

MNLHND

Manila Ninoy Aquino Intl

Tue 3/2

7:10 pm-12:15 am

Nonstop4h 05m

Tokyo Haneda

Wed 12/31

12:00 am-11:00 pm

Nonstop0h 00m

$179

Flights are sorted by cheapest round-trip flights first.

Deals found on 10/24

Showing 1-10 of 60 resultsSorted by cheapest first
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Best time to book a flight from Manila to Japan

Have a flexible travel schedule? Discover the best time to fly to Japan from Manila with our price prediction graph.
Estimated round-trip price

Cheapflights Insights

Everything you need to know about your flight from Manila to Japan

What is the cheapest month to book a flight from Manila to Japan?

Currently, February is the cheapest month in which you can book a flight from Manila to Japan (average of $266). Flying from Manila to Japan in December is currently the most expensive (average of $377). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from MNL to JP?

It’s typically best to fly out from Manila to Japan in the evening. Doing so could potentially save you 23% on the flight price compared to flying in the morning, which is usually more expensive.

Weekly flight availability from Manila to Japan

The most flights from MNL to JP0 are scheduled on a Sunday (3 on average). You will have fewer flight options on Tuesday, which is when the least amount of flights are scheduled (1 on average).

How often are flights from Manila to Japan delayed?

About 10% of weekly flights between Manila and Japan have experienced delays in the past year, with the average delay time being 130 minutes.

What is the most punctual flight time for Manila to Japan flights?

Historically, flights departing in the evening are less likely to be delayed, whereas flights leaving at night tend to experience delays more often.

What day of the week experiences the fewest flight delays on this route?

Thursday tends to have the lowest number of delays on this route, whereas Saturday has historically faced a higher average of delays compared to other days of the week.

Which airline has the best punctuality record on Manila to Japan flights?

Over the last year, ANA have had the lowest number of delays on this route, with just 5% of flights being delayed.

How far ahead should I book a flight from Manila to Japan?

The best time to book flights from Manila to Japan is 88 days before your desired departure date. The cost of your flight will likely increase significantly if you book two weeks in advance of your flight.

What is the cheapest day to fly from Manila to Japan?

Travelers seeking maximum savings on their Manila to Japan flight should consider departing on Tuesday evenings when fares are most often at their lowest. Monday afternoons flights should be avoided if possible as fares are typically the most expensive at this time.

Reviews of airlines servicing Japan

Read through reviews of airlines operating flights from Manila to Japan, such as Cathay Pacific,Philippine Airlines, andCebu Pacific. Reviews also offer insight into each airline's entertainment options, comfort, food, crew/service, and boarding process.

Crew

8.1

Food

7.3

Comfort

7.6

Boarding

7.9

Overall

7.6

Entertainment

7.8

Reviews

1 / 20
4.0
Okay

Paden,Oct 2026

SEA - HKG

Ground staff at Seattle counter were excellent . Business class on board experience was very disappointing. There was no pajamas, no bed turn down service and the service was very mediocre took long time to get one extra roll of bread. Not very forthcoming quite curt in general. Also was situated in the middle row first row whole night being right next to the toilet not able to get any sleep. The entertainment wad very outdated too! Sorry to complain but I had high hopes for Cathay as I have flow years ago and the experience then was like night and day. Usually fly Qatar or Emirates the service doesn't compare. My flight from HKG to Delhi was much better. Thanks

Crew

8.1

Food

7.3

Comfort

7.6

Boarding

7.9

Overall

7.6

Entertainment

7.8

Reviews

1 / 20
4.0
Okay

Paden,Oct 2026

SEA - HKG

Ground staff at Seattle counter were excellent . Business class on board experience was very disappointing. There was no pajamas, no bed turn down service and the service was very mediocre took long time to get one extra roll of bread. Not very forthcoming quite curt in general. Also was situated in the middle row first row whole night being right next to the toilet not able to get any sleep. The entertainment wad very outdated too! Sorry to complain but I had high hopes for Cathay as I have flow years ago and the experience then was like night and day. Usually fly Qatar or Emirates the service doesn't compare. My flight from HKG to Delhi was much better. Thanks

Crew

8.1

Food

7.3

Comfort

7.6

Boarding

7.9

Overall

7.6

Entertainment

7.8

Reviews

1 / 20
4.0
Okay

Paden,Oct 2026

SEA - HKG

Ground staff at Seattle counter were excellent . Business class on board experience was very disappointing. There was no pajamas, no bed turn down service and the service was very mediocre took long time to get one extra roll of bread. Not very forthcoming quite curt in general. Also was situated in the middle row first row whole night being right next to the toilet not able to get any sleep. The entertainment wad very outdated too! Sorry to complain but I had high hopes for Cathay as I have flow years ago and the experience then was like night and day. Usually fly Qatar or Emirates the service doesn't compare. My flight from HKG to Delhi was much better. Thanks

Crew

8.1

Food

7.3

Comfort

7.6

Boarding

7.9

Overall

7.6

Entertainment

7.8

Reviews

1 / 20
4.0
Okay

Paden,Oct 2026

SEA - HKG

Ground staff at Seattle counter were excellent . Business class on board experience was very disappointing. There was no pajamas, no bed turn down service and the service was very mediocre took long time to get one extra roll of bread. Not very forthcoming quite curt in general. Also was situated in the middle row first row whole night being right next to the toilet not able to get any sleep. The entertainment wad very outdated too! Sorry to complain but I had high hopes for Cathay as I have flow years ago and the experience then was like night and day. Usually fly Qatar or Emirates the service doesn't compare. My flight from HKG to Delhi was much better. Thanks

Crew

8.1

Food

7.3

Comfort

7.6

Boarding

7.9

Overall

7.6

Entertainment

7.8

Reviews

1 / 20
4.0
Okay

Paden,Oct 2026

SEA - HKG

Ground staff at Seattle counter were excellent . Business class on board experience was very disappointing. There was no pajamas, no bed turn down service and the service was very mediocre took long time to get one extra roll of bread. Not very forthcoming quite curt in general. Also was situated in the middle row first row whole night being right next to the toilet not able to get any sleep. The entertainment wad very outdated too! Sorry to complain but I had high hopes for Cathay as I have flow years ago and the experience then was like night and day. Usually fly Qatar or Emirates the service doesn't compare. My flight from HKG to Delhi was much better. Thanks

Related info for your journey

  • What airport do you fly from for flights from Manila to Japan?

    Most people fly from Manila Ninoy Aquino Intl (MNL) if they book a flight from Manila to Japan. Manila Ninoy Aquino Intl is conveniently located just 6.8 mi from Manila’s city center.

  • How popular is this Manila to Japan flight route?

  • How long is the flight from Manila to Japan?

    For as low as $345, Philippine Airlines can have you in Japan from Manila in 4h 05m. The distance between Manila and Japan is about 1861 mi. When browsing for deals, the options you’ll see will be for both nonstop flights and flights with stops.

  • What are the cheapest airlines to fly from Manila to Japan one-way?

    To fly one-way, consider booking your trip with Cebu Pacific, which is currently one of the cheapest options available, starting at $36. Philippines AirAsia flights start at $67 while deals on Jetstar Japan start at $67 one-way.

  • What are the most popular routes from Manila to Japan?

  • What are the most reliable airlines from Manila to Japan?

    Before booking your flight to Japan from Manila, check out the most reliable airlines to get you to your destination on time: Cebu Pacific (89%), Philippine Airlines (86%), ANA( 86%).

  • What are the cheapest flights from Manila to Japan?

    While on average a flight from Manila to Japan is generally $246, our data shows the cheapest flight currently is $102. When looking at the most popular route, (Manila Ninoy Aquino Intl - Tokyo Haneda), you can expect to pay $385 for that flight.

  • Can I find deals for flights from Manila to Japan that include hotel bookings?

    Yes. In addition to deals on Manila to Japan flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Manila to Japan?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Manila to Japan.

  • Can I find deals for business class flights from Manila to Japan?

    Yes. Cheapflights offers flight deals from Manila to Japan by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Manila to Japan?

    Currently, February is the cheapest month in which you can book a flight from Manila to Japan (average of $266). Flying from Manila to Japan in December is currently the most expensive (average of $377). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

Top 10 airlines flying from Manila to Japan

AirlineCheapestAverageFlexibilityOn-time
Jetstar JapanCheapest$83Average$276FlexibilityNo cancel feeOn-timeN/A
Philippines AirAsiaCheapest$100Average$217FlexibilityNo cancel feeOn-time53%
Cebu PacificCheapest$139Average$308FlexibilityNo cancel feeOn-time64%
ZIPAIRCheapest$146Average$280FlexibilityNo cancel feeOn-timeN/A
Philippine AirlinesCheapest$210Average$358FlexibilityNo cancel feeOn-time60%
Cathay PacificCheapest$224Average$375FlexibilityNo cancel feeOn-time72%
Japan AirlinesCheapest$275Average$481FlexibilityNo cancel feeOn-time79%
HK ExpressCheapest$284Average$420FlexibilityNo cancel feeOn-time90%
ANACheapest$287Average$506FlexibilityNo cancel feeOn-time80%
EVA AirCheapest$444Average$668FlexibilityNo cancel feeOn-time74%

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