$204+ Cheap flights from San Juan to San Diego (SAN)
This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 7/25. Fares are subject to change and may not be available on all flights or dates of travel.
SJU — SAN
Jun 14 — Jun 211
Round-trip
1 adult, Economy
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Cheapest flights from San Juan to San DiegoExplore the most affordable flight options available from San Juan to San Diego. Find the lowest fares from popular airlines and budget airlines, with prices last updated on May 15, 2026.
Explore the most affordable flight options available from San Juan to San Diego. Find the lowest fares from popular airlines and budget airlines, with prices last updated on May 15, 2026.
This Delta deal was found by Cheapflights users on 5/13. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 8/262:59 pm
SJU
- SAN
1 stop11h 01m
Delta
Sun 8/307:13 pm
SAN
- SJU
2 stops13h 43m
Delta
Deal found 5/13![Delta logo]()
$386
This American Airlines deal was found by Cheapflights users on 5/14. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 8/67:14 pm
SJU
- SAN
1 stop19h 18m
American Airlines
Mon 8/1010:45 pm
SAN
- SJU
1 stop19h 29m
American Airlines
Deal found 5/14![American Airlines logo]()
$396
This American Airlines deal was found by Cheapflights users on 5/14. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 8/296:00 am
SJU
- SAN
2 stops11h 14m
American Airlines
Mon 8/314:22 pm
SAN
- SJU
2 stops14h 21m
American Airlines
Deal found 5/14![American Airlines logo]()
$405
This JetBlue deal was found by Cheapflights users on 5/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure JetBlue is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 6/57:00 am
SJU
- SAN
1 stop15h 07m
JetBlue
Fri 6/128:40 pm
SAN
- SJU
1 stop13h 20m
JetBlue
Deal found 5/11![JetBlue logo]()
$425
This Southwest deal was found by Cheapflights users on 5/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 9/172:35 pm
SJU
- SAN
2 stops10h 30m
Southwest
Mon 9/2110:40 pm
SAN
- SJU
2 stops10h 40m
Southwest
Deal found 5/10![Southwest logo]()
$426
This United Airlines deal was found by Cheapflights users on 5/14. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 7/231:40 pm
SJU
- SAN
1 stop11h 45m
United Airlines
Tue 7/285:15 pm
SAN
- SJU
1 stop9h 14m
United Airlines
Deal found 5/14![United Airlines logo]()
$427
This American Airlines deal was found by Cheapflights users on 5/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 10/298:30 am
SJU
- SAN
1 stop14h 28m
American Airlines
Wed 11/46:30 am
SAN
- SJU
1 stop13h 17m
American Airlines
Deal found 5/10![American Airlines logo]()
$431
This Delta deal was found by Cheapflights users on 5/14. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 8/62:11 pm
SJU
- SAN
2 stops12h 39m
Delta
Mon 8/106:14 pm
SAN
- SJU
2 stops16h 28m
Delta
Deal found 5/14![Delta logo]()
$432
This American Airlines deal was found by Cheapflights users on 5/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 9/312:59 am
SJU
- SAN
1 stop11h 03m
American Airlines
Sun 9/67:15 pm
SAN
- SJU
2 stops11h 28m
American Airlines
Deal found 5/11![American Airlines logo]()
$437
This American Airlines deal was found by Cheapflights users on 5/13. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 12/26:00 am
SJU
- SAN
1 stop9h 42m
American Airlines
Wed 12/24:45 pm
SAN
- SJU
1 stop8h 34m
American Airlines
Deal found 5/13![American Airlines logo]()
$441
This Southwest deal was found by Cheapflights users on 5/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 10/295:00 am
SJU
- SAN
2 stops11h 00m
Southwest
Wed 11/46:35 am
SAN
- SJU
1 stop12h 45m
Southwest
Deal found 5/10![Southwest logo]()
$445
This United Airlines deal was found by Cheapflights users on 5/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 11/198:30 am
SJU
- SAN
1 stop11h 03m
United Airlines
Thu 11/268:35 am
SAN
- SJU
1 stop9h 47m
United Airlines
Deal found 5/11![United Airlines logo]()
$448
Best flights from San Juan to San DiegoDiscover carefully curated flight deals from San Juan to San Diego that have cost, travel time, and layovers in mind to ensure you get the best travel experience. Data last updated May 15, 2026.
Discover carefully curated flight deals from San Juan to San Diego that have cost, travel time, and layovers in mind to ensure you get the best travel experience. Data last updated May 15, 2026.
This Delta deal was found by Cheapflights users on 5/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 7/282:21 pm
SJU
- SAN
2 stops12h 29m
Delta
Sun 8/210:15 pm
SAN
- SJU
1 stop11h 40m
Delta
Deal found 5/10![Delta logo]()
$471
This Southwest deal was found by Cheapflights users on 5/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 7/75:30 am
SJU
- SAN
2 stops11h 35m
Southwest
Tue 7/149:00 am
SAN
- SJU
1 stop11h 45m
Southwest
Deal found 5/10![Southwest logo]()
$526
This American Airlines deal was found by Cheapflights users on 5/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 7/77:14 pm
SJU
- SAN
1 stop18h 58m
American Airlines
Tue 7/146:15 am
SAN
- SJU
1 stop14h 33m
American Airlines
Deal found 5/10![American Airlines logo]()
$547
This United Airlines deal was found by Cheapflights users on 5/15. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 5/237:00 am
SJU
- SAN
1 stop9h 21m
United Airlines
Tue 6/303:10 pm
SAN
- SJU
1 stop11h 19m
United Airlines
Deal found 5/15![United Airlines logo]()
$694
This Southwest deal was found by Cheapflights users on 5/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 7/199:05 pm
SJU
- SAN
2 stops16h 50m
Southwest
Tue 7/286:40 am
SAN
- SJU
2 stops12h 20m
Southwest
Deal found 5/11![Southwest logo]()
$572
This Delta deal was found by Cheapflights users on 5/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 7/162:42 pm
SJU
- SAN
1 stop11h 15m
Delta
Fri 7/247:13 pm
SAN
- SJU
2 stops14h 58m
Delta
Deal found 5/11![Delta logo]()
$627
This Delta deal was found by Cheapflights users on 5/12. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 6/32:35 pm
SJU
- SAN
2 stops12h 08m
Delta
Sat 6/67:30 am
SAN
- SJU
1 stop13h 05m
Delta
Deal found 5/12![Delta logo]()
$627
This Southwest deal was found by Cheapflights users on 5/13. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 7/156:30 am
SJU
- SAN
2 stops14h 50m
Southwest
Thu 7/2311:15 am
SAN
- SJU
1 stop10h 00m
Southwest
Deal found 5/13![Southwest logo]()
$635
Last-minute flights from San Juan to San DiegoDiscover last-minute flight deals from San Juan to San Diego. Data last updated May 15, 2026 and is based on user searches.
Discover last-minute flight deals from San Juan to San Diego. Data last updated May 15, 2026 and is based on user searches.
This Faresmojo deal was found by Cheapflights users on 5/13. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Faresmojo is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 5/167:30 am
SJU
- SAN
1 stop12h 00m
JetBlue
Thu 5/217:30 am
SAN
- SJU
1 stop13h 05m
JetBlue
Deal found 5/13![JetBlue logo]()
$525
This Kiwi.com deal was found by Cheapflights users on 5/14. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 5/227:00 am
SJU
- SAN
1 stop31h 44m
Multiple Airlines
Wed 5/2712:29 pm
SAN
- SJU
1 stop23h 04m
Multiple Airlines
Deal found 5/14![Multiple Airlines logo]()
$531
This Kiwi.com deal was found by Cheapflights users on 5/14. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 5/297:00 am
SJU
- SAN
1 stop31h 44m
Multiple Airlines
Thu 6/46:25 am
SAN
- SJU
2 stops38h 34m
Multiple Airlines
Deal found 5/14![Multiple Airlines logo]()
$501
This Kiwi.com deal was found by Cheapflights users on 5/14. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 5/297:00 am
SJU
- SAN
1 stop31h 44m
Multiple Airlines
Wed 6/36:25 am
SAN
- SJU
2 stops38h 34m
Multiple Airlines
Deal found 5/14![Multiple Airlines logo]()
$523
This JetBlue deal was found by Cheapflights users on 5/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure JetBlue is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 5/309:52 am
SJU
- SAN
1 stop12h 15m
JetBlue
Fri 6/128:40 pm
SAN
- SJU
1 stop13h 20m
JetBlue
Deal found 5/11![JetBlue logo]()
$524
This JetBlue deal was found by Cheapflights users on 5/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure JetBlue is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 6/27:20 am
SJU
- SAN
1 stop15h 13m
JetBlue
Fri 6/128:40 pm
SAN
- SJU
1 stop13h 20m
JetBlue
Deal found 5/11![JetBlue logo]()
$518
This JetBlue deal was found by Cheapflights users on 5/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure JetBlue is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 6/57:00 am
SJU
- SAN
1 stop15h 07m
JetBlue
Fri 6/128:40 pm
SAN
- SJU
1 stop13h 20m
JetBlue
Deal found 5/11![JetBlue logo]()
$425
This American Airlines deal was found by Cheapflights users on 5/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 6/57:00 am
SJU
- SAN
1 stop17h 48m
American Airlines
Tue 6/166:15 am
SAN
- SJU
1 stop13h 45m
American Airlines
Deal found 5/11![American Airlines logo]()
$508
This American Airlines deal was found by Cheapflights users on 5/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 6/611:56 am
SJU
- SAN
1 stop13h 23m
American Airlines
Mon 6/810:26 pm
SAN
- SJU
1 stop14h 21m
American Airlines
Deal found 5/11![American Airlines logo]()
$466
This American Airlines deal was found by Cheapflights users on 5/15. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 6/97:00 am
SJU
- SAN
1 stop17h 48m
American Airlines
Tue 6/236:15 am
SAN
- SJU
1 stop13h 45m
American Airlines
Deal found 5/15![American Airlines logo]()
$504
This Southwest deal was found by Cheapflights users on 5/14. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 6/103:45 pm
SJU
- SAN
1 stop10h 40m
Southwest
Sat 7/46:20 am
SAN
- SJU
1 stop12h 25m
Southwest
Deal found 5/14![Southwest logo]()
$513
This Faresmojo deal was found by Cheapflights users on 5/13. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Faresmojo is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 6/128:25 am
SJU
- SAN
1 stop14h 05m
JetBlue
Mon 6/158:44 pm
SAN
- SJU
1 stop14h 30m
JetBlue
Deal found 5/13![JetBlue logo]()
$526
One-way flights from San Juan to San DiegoSearch for one-way flight options from San Juan to San Diego. Find affordable one-way fares based on user searches. Data last updated May 15, 2026.
Search for one-way flight options from San Juan to San Diego. Find affordable one-way fares based on user searches. Data last updated May 15, 2026.
This Kiwi.com deal was found by Cheapflights users on 5/12. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 7/259:00 am
SJU
- SAN
2 stops27h 05m
Frontier
Deal found 5/12![Frontier logo]()
$204
This Kiwi.com deal was found by Cheapflights users on 5/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 6/178:50 am
SJU
- SAN
2 stops27h 19m
Frontier
Deal found 5/11![Frontier logo]()
$205
This Cheapflightsfares deal was found by Cheapflights users on 5/14. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Cheapflightsfares is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 6/118:30 am
SJU
- SAN
1 stop14h 00m
JetBlue
Deal found 5/14![JetBlue logo]()
$208
This Kiwi.com deal was found by Cheapflights users on 5/13. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 6/198:50 am
SJU
- SAN
2 stops26h 52m
Frontier
Deal found 5/13![Frontier logo]()
$223
This Kiwi.com deal was found by Cheapflights users on 5/13. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 7/249:00 am
SJU
- SAN
2 stops41h 51m
Frontier
Deal found 5/13![Frontier logo]()
$226
This Kiwi.com deal was found by Cheapflights users on 5/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 6/128:50 am
SJU
- SAN
2 stops26h 52m
Frontier
Deal found 5/11![Frontier logo]()
$227
This Kiwi.com deal was found by Cheapflights users on 5/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 6/69:45 pm
SJU
- SAN
2 stops37h 57m
Frontier
Deal found 5/10![Frontier logo]()
$232
This American Airlines deal was found by Cheapflights users on 5/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 6/62:56 pm
SJU
- SAN
1 stop10h 23m
American Airlines
Deal found 5/10![American Airlines logo]()
$233
This American Airlines deal was found by Cheapflights users on 5/13. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 6/126:21 am
SJU
- SAN
1 stop15h 14m
American Airlines
Deal found 5/13![American Airlines logo]()
$238
This Delta deal was found by Cheapflights users on 5/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 6/56:15 am
SJU
- SAN
2 stops15h 30m
Delta
Deal found 5/11![Delta logo]()
$239
This Kiwi.com deal was found by Cheapflights users on 5/13. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 6/26:41 pm
SJU
- SAN
2 stops32h 09m
Frontier
Deal found 5/13![Frontier logo]()
$243
This Southwest deal was found by Cheapflights users on 5/14. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 6/103:45 pm
SJU
- SAN
1 stop10h 40m
Southwest
Deal found 5/14![Southwest logo]()
$252
Find flight deals from San Juan to San Diego
Discover tips and strategies to find the most affordable flight options for your journey from San Juan (PR1) to San Diego (SAN). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated May 15, 2026.
Round-trip from | $386 (Delta) |
|---|---|
One-way from | $204 (Kiwi.com) |
Popular in | May |
Cheapest in | October |
Average price | $536 |
Cheapflights Fare Finder
Customize your flight search to find flights from San Juan to San Diego that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated May 15, 2026.
Use the filters below to find and compare flights from San Juan to San Diego that are best for you.
Fly from
Fly to
Route
Depart
Return
Cheapest round-trip
San JuanSan Diego
SJU - SAN
SJUSAN
San Juan Luis Munoz Marin Intl
Tue 7/28
2:21 pm-11:50 pm
2 stops12h 29m
San Diego
Sun 8/2
10:15 pm-12:55 pm
1 stop11h 40m
$471
San JuanSan Diego
SJU - SAN
SJUSAN
San Juan Luis Munoz Marin Intl
Tue 7/7
5:30 am-2:05 pm
2 stops11h 35m
San Diego
Tue 7/14
9:00 am-11:45 pm
1 stop11h 45m
$526
San JuanSan Diego
SJU - SAN
SJUSAN
San Juan Luis Munoz Marin Intl
Tue 7/7
7:14 pm-11:12 am
1 stop18h 58m
San Diego
Tue 7/14
6:15 am-11:48 pm
1 stop14h 33m
$547
San JuanSan Diego
SJU - SAN
SJUSAN
San Juan Luis Munoz Marin Intl
Sun 7/19
9:05 pm-10:55 am
2 stops16h 50m
San Diego
Tue 7/28
6:40 am-10:00 pm
2 stops12h 20m
$572
San JuanSan Diego
SJU - SAN
SJUSAN
San Juan Luis Munoz Marin Intl
Thu 7/16
2:42 pm-10:57 pm
1 stop11h 15m
San Diego
Fri 7/24
7:13 pm-1:11 pm
2 stops14h 58m
$627
San JuanSan Diego
SJU - SAN
SJUSAN
San Juan Luis Munoz Marin Intl
Wed 6/3
2:35 pm-11:43 pm
2 stops12h 08m
San Diego
Sat 6/6
7:30 am-11:35 pm
1 stop13h 05m
$627
San JuanSan Diego
SJU - SAN
SJUSAN
San Juan Luis Munoz Marin Intl
Wed 7/15
6:30 am-6:20 pm
2 stops14h 50m
San Diego
Thu 7/23
11:15 am-12:15 am
1 stop10h 00m
$635
Quickest round-trip
San JuanSan Diego
SJU - SAN
SJUSAN
San Juan Luis Munoz Marin Intl
Sat 5/23
7:00 am-1:21 pm
1 stop9h 21m
San Diego
Tue 6/30
3:10 pm-5:29 am
1 stop11h 19m
$694
Cheapest one-way
San JuanSan Diego
SJU - SAN
SJUSAN
San Juan Luis Munoz Marin Intl
Thu 6/11
8:30 am-7:30 pm
1 stop14h 00m
$208
San JuanSan Diego
SJU - SAN
SJUSAN
San Juan Luis Munoz Marin Intl
Sat 6/6
9:45 pm-8:42 am
2 stops37h 57m
$232
Showing 1-10 of 20 resultsSorted by cheapest first
Best time to book a flight from San Juan to San Diego
Have a flexible travel schedule? Discover the best time to fly to San Diego from San Juan with our price prediction graph.
PR1-SAN
SJU-SAN
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.
Cheapflights Insights
Everything you need to know about your flight from San Juan to San Diego
PR1-SAN
SJU-SAN
How far ahead should I book a flight from San Juan to San Diego?
Booking 83 days in advance of your planned departure date is, on average, the best time to get cheap flights from San Juan to San Diego. The general trend is that the closer you book to the departure date, the more expensive your flight will be.
What is the cheapest month to book a flight from San Juan to San Diego?
Currently, June is the cheapest month in which you can book a flight from San Juan to San Diego (average of $137). Flying from San Juan to San Diego in January is currently the most expensive (average of $339). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.
How much does it cost to fly round-trip from San Juan to San Diego?
Reviews of airlines servicing San Diego
Get insights into the airlines that provide service to San Diego. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to San Diego. Reviews last updated May 15, 2026.
Read through reviews of airlines operating flights from San Juan to San Diego, such as Southwest,Delta, andUnited Airlines. Reviews also offer insight into each airline's entertainment options, comfort, food, crew/service, and boarding process.
Comfort
8.0
Crew
8.6
Boarding
8.1
Food
7.0
Overall
8.0
Entertainment
7.5
Reviews
1 / 20
2.0
MediocreDominic,Mar 2026
MCO - SMF
Comfort
8.0
Crew
8.6
Boarding
8.1
Food
7.0
Overall
8.0
Entertainment
7.5
Reviews
1 / 20
2.0
MediocreDominic,Mar 2026
MCO - SMF
Comfort
8.0
Crew
8.6
Boarding
8.1
Food
7.0
Overall
8.0
Entertainment
7.5
Reviews
1 / 20
2.0
MediocreDominic,Mar 2026
MCO - SMF
Comfort
8.0
Crew
8.6
Boarding
8.1
Food
7.0
Overall
8.0
Entertainment
7.5
Reviews
1 / 20
2.0
MediocreDominic,Mar 2026
MCO - SMF
Comfort
8.0
Crew
8.6
Boarding
8.1
Food
7.0
Overall
8.0
Entertainment
7.5
Reviews
1 / 20
2.0
MediocreDominic,Mar 2026
MCO - SMF
Comfort
8.0
Crew
8.6
Boarding
8.1
Food
7.0
Overall
8.0
Entertainment
7.5
Reviews
1 / 20
2.0
MediocreDominic,Mar 2026
MCO - SMF
Related info for your journey
Find useful and relevant information for your journey from San Juan to San Diego. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.
Traveling to a place near San Diego?
Book flights to San Diego if you plan to visit one of these locationsEl Cajon
Chula Vista
National City
Coronado
Poway
La Mesa
Julian
Lemon Grove
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San Juan and San Diego flights
Browse other San Juan and San Diego flight options. Last updated on May 15, 2026.
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Other flights to San Diego
Explore flights to San Diego departing from other origins. Flights are based on user searches made on Cheapflights and were last updated on May 15, 2026.
Top 5 airlines flying from San Juan to San Diego
Discover the top 5 airlines that operate flights from San Juan to San Diego. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated May 15, 2026.
| Airline | Cheapest | Average | Flexibility | On-time |
|---|---|---|---|---|
| Cheapest$295 | Average$603 | FlexibilityNo cancel fee | On-timeN/A | |
| Cheapest$295 | Average$495 | FlexibilityNo cancel fee | On-time69% | |
| Cheapest$295 | Average$466 | FlexibilityNo cancel fee | On-time71% | |
| Cheapest$326 | Average$479 | FlexibilityNo cancel fee | On-time63% | |
| Cheapest$327 | Average$473 | FlexibilityNo cancel fee | On-time62% |