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San Juan

$93+ Cheap flights from Boston (BOS) to San Juan

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 1/13. Fares are subject to change and may not be available on all flights or dates of travel.
BOS — SJU
Jan 3 — Jan 101
Sat 1/3
Sat 1/10
1 adult, Economy
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Cheapflights Tip: The best prices from Boston Logan Intl to San Juan are usually found in January or March, booked 44 days in advance, depart on a Wednesday or Monday and return on a Saturday

Cheap flight deals from Boston to San Juan

Cheapest flights from Boston to San Juan
Explore the most affordable flight options available from Boston to San Juan. Find the lowest fares from popular airlines and budget airlines, with prices last updated on December 4, 2025.

This Kiwi.com deal was found by Cheapflights users on 12/3. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 12/307:34 pmBOS - SJU
Nonstop4h 07mMultiple Airlines
Wed 1/144:35 pmSJU - BOS
1 stop9h 38mMultiple Airlines
Deal found 12/3$160
This Priceline deal was found by Cheapflights users on 12/4. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Priceline is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 12/307:34 pmBOS - SJU
Nonstop4h 07mMultiple Airlines
Fri 1/26:01 amSJU - BOS
Nonstop4h 12mMultiple Airlines
Deal found 12/4$161
This Kiwi.com deal was found by Cheapflights users on 12/3. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 12/307:34 pmBOS - SJU
Nonstop4h 07mSpirit Airlines
Thu 1/154:40 pmSJU - BOS
1 stop8h 17mSpirit Airlines
Deal found 12/3$166
This Super.com deal was found by Cheapflights users on 12/4. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Super.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 12/1410:22 amBOS - SJU
1 stop8h 46mFrontier
Thu 12/188:00 amSJU - BOS
Nonstop4h 23mFrontier
Deal found 12/4$167
This Trip.com deal was found by Cheapflights users on 12/3. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Trip.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 12/317:34 pmBOS - SJU
Nonstop4h 07mMultiple Airlines
Thu 1/86:15 amSJU - BOS
Nonstop4h 10mMultiple Airlines
Deal found 12/3$169
This Frontier deal was found by Cheapflights users on 12/2. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Frontier is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 12/1210:52 amBOS - SJU
1 stop11h 22mFrontier
Tue 12/238:00 amSJU - BOS
Nonstop4h 23mFrontier
Deal found 12/2$170
This Kiwi.com deal was found by Cheapflights users on 12/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 12/148:11 pmBOS - SJU
1 stop13h 22mSpirit Airlines
Mon 12/223:15 pmSJU - BOS
Nonstop4h 24mSpirit Airlines
Deal found 12/1$171
This Kiwi.com deal was found by Cheapflights users on 12/2. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 12/1210:52 amBOS - SJU
1 stop11h 22mFrontier
Thu 12/258:00 amSJU - BOS
Nonstop4h 23mFrontier
Deal found 12/2$172
This Justfly.com deal was found by Cheapflights users on 12/3. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Justfly.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 12/78:11 pmBOS - SJU
1 stop13h 22mMultiple Airlines
Thu 12/188:00 amSJU - BOS
Nonstop4h 23mMultiple Airlines
Deal found 12/3$174
This Kiwi.com deal was found by Cheapflights users on 12/3. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 12/78:11 pmBOS - SJU
1 stop13h 22mMultiple Airlines
Tue 12/238:00 amSJU - BOS
Nonstop4h 23mMultiple Airlines
Deal found 12/3$175
This Trip.com deal was found by Cheapflights users on 12/2. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Trip.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 12/912:55 pmBOS - SJU
Nonstop4h 02mJetBlue
Tue 12/166:10 amSJU - BOS
Nonstop4h 09mJetBlue
Deal found 12/2$176
This Kiwi.com deal was found by Cheapflights users on 12/3. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 12/1410:22 amBOS - SJU
1 stop8h 46mFrontier
Thu 12/258:00 amSJU - BOS
Nonstop4h 23mFrontier
Deal found 12/3$177

Find flight deals from Boston to San Juan

Discover tips and strategies to find the most affordable flight options for your journey from Boston (BOS) to San Juan (PR1). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated December 4, 2025.

Round-trip from

$158
(CheapOair)

One-way from

$93
(Delta)

Popular in

December

Cheapest in

January

Average price

$379
From Boston Logan Intl to San Juan
Search Deals
One-way flight from Boston Logan Intl to San Juan
Search Deals
Highest demand for flights based on searches. 2% potential increase in price ($8 potential increase over avg. RT price).
Search Deals
Cheapest flight prices on average. 2% potential price decrease ($7 potential savings vs. average RT price).
Search Deals
Average for round-trip flights in December 2025
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Cheapflights Fare Finder

 
Customize your flight search to find flights from Boston to San Juan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated December 4, 2025.
Use the filters below to find and compare flights from Boston to San Juan that are best for you.

Fly from

Boston

Fly to

San Juan

Route

Depart

Return

Price

BostonSan Juan

BOS - SJU

BOSSJU

Boston Logan Intl

Mon 1/19

3:43 pm-9:47 am

1 stop17h 04m

San Juan Luis Munoz Marin Intl

Sat 1/24

6:00 am-2:38 pm

1 stop9h 38m

$177

BostonSan Juan

BOS - SJU

BOSSJU

Boston Logan Intl

Sun 1/11

5:34 am-3:35 pm

1 stop9h 01m

San Juan Luis Munoz Marin Intl

Sat 1/17

6:00 am-2:38 pm

1 stop9h 38m

$177

BostonSan Juan

BOS - SJU

BOSSJU

Boston Logan Intl

Sun 2/1

6:00 am-4:50 pm

1 stop9h 50m

San Juan Luis Munoz Marin Intl

Wed 2/4

2:25 pm-5:45 pm

Nonstop4h 20m

$191

BostonSan Juan

BOS - SJU

BOSSJU

Boston Logan Intl

Mon 2/2

5:45 am-1:17 pm

1 stop6h 32m

San Juan Luis Munoz Marin Intl

Fri 2/6

2:15 pm-11:49 pm

2 stops10h 34m

$195

BostonSan Juan

BOS - SJU

BOSSJU

Boston Logan Intl

Sun 1/25

6:00 am-1:05 pm

1 stop6h 05m

San Juan Luis Munoz Marin Intl

Mon 2/2

7:00 am-3:53 pm

1 stop9h 53m

$195

BostonSan Juan

BOS - SJU

BOSSJU

Boston Logan Intl

Sun 3/8

4:55 pm-8:56 pm

Nonstop4h 01m

San Juan Luis Munoz Marin Intl

Thu 3/12

5:10 am-9:22 am

Nonstop4h 12m

$202

BostonSan Juan

BOS - SJU

BOSSJU

Boston Logan Intl

Tue 2/10

12:08 pm-10:22 pm

2 stops9h 14m

San Juan Luis Munoz Marin Intl

Wed 2/25

7:45 am-6:13 pm

1 stop11h 28m

$203

BostonSan Juan

BOS - SJU

BOSSJU

Boston Logan Intl

Tue 2/24

8:05 am-1:11 pm

Nonstop4h 06m

San Juan Luis Munoz Marin Intl

Tue 3/10

6:15 am-5:32 pm

1 stop11h 17m

$207

BostonSan Juan

BOS - SJU

BOSSJU

Boston Logan Intl

Mon 2/9

10:30 am-9:00 pm

1 stop9h 30m

San Juan Luis Munoz Marin Intl

Wed 2/25

8:35 am-6:41 pm

2 stops11h 06m

$212

BostonSan Juan

BOS - SJU

BOSSJU

Boston Logan Intl

Mon 2/2

6:45 pm-11:48 pm

Nonstop4h 03m

San Juan Luis Munoz Marin Intl

Fri 2/6

7:15 pm-10:28 pm

Nonstop4h 13m

$245

Flights are sorted by cheapest round-trip flights first.

Deals found on 12/3

Showing 1-10 of 20 results
1
2

Best time to book a flight from Boston to San Juan

Have a flexible travel schedule? Discover the best time to fly to San Juan from Boston with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Boston to San Juan

How far ahead should I book a flight from Boston to San Juan?

Use this chart to determine the optimal time to book a round-trip flight from Boston to San Juan. Price data was last updated on November 28, 2025.

The best time to book flights from Boston to San Juan is 44 days before your desired departure date. The cost of your flight will likely increase significantly if you book two weeks in advance of your flight.

What is the cheapest month to book a flight from Boston to San Juan?

Currently, February is the cheapest month in which you can book a flight from Boston to San Juan (average of $65). Flying from Boston to San Juan in September is currently the most expensive (average of $147). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from BOS to SJU?

Find hourly flight availability from Boston to San Juan. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated December 4, 2025.

A simple way to save on the total cost of your ticket is to fly from Boston to San Juan in the afternoon. If you’re flexible enough to do this you can expect to save up to 50% on your trip compared to booking a flight in the evening.

What is the cheapest day to fly from Boston to San Juan?

Use this chart to determine the cheapest time to fly round-trip from Boston to San Juan. Price data was last updated on December 16, 2024.

Travelers seeking maximum savings on their Boston to San Juan flight should consider departing on Thursday mornings when fares are most often at their lowest. Sunday afternoons flights should be avoided if possible as fares are typically the most expensive at this time.

Weekly flight availability from Boston to San Juan

Explore weekly flight availability from Boston to San Juan. Discover flights operating on different days of the week, giving you the flexibility to choose a travel day that best fits your plans. Compare info to find the most convenient option for your journey. Data last updated December 4, 2025.

The most flights from BOS to PR1 are scheduled on a Thursday (13 on average). You will have fewer flight options on Saturday, which is when the least amount of flights are scheduled (1 on average).

How often are flights from Boston to San Juan delayed?

About 24% of weekly flights between Boston and San Juan have experienced delays in the past year, with the average delay time being 144 minutes.

What is the most punctual flight time for Boston to San Juan flights?

Historically, flights departing in the morning are less likely to be delayed, whereas flights leaving at night tend to experience delays more often.

What day of the week experiences the fewest flight delays on this route?

Wednesday tends to have the lowest number of delays on this route, whereas Thursday has historically faced a higher average of delays compared to other days of the week.

Which airline has the best punctuality record on Boston to San Juan flights?

Over the last year, Delta have had the lowest number of delays on this route, with just 17% of flights being delayed.

Reviews of airlines servicing San Juan

Get insights into the airlines that provide service to San Juan. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to San Juan. Reviews last updated December 4, 2025.
Get a feel of what it's like to fly with Delta, American Airlines, and JetBlue from Boston to San Juan by reading reviews from past customers. Users have also rated airlines in terms of entertainment options, comfort, food, crew/service, and boarding process.
Delta
7.9
Good
8,011 reviews

Crew

8.5

Food

7.3

Comfort

7.9

Overall

7.9

Boarding

8.1

Entertainment

7.9

Reviews

1 / 20
6.0
Good

Jim,Nov 2025

AVL - ATL

The exit row seats without a seat in front are great for leg room but don’t have a fold out entertainment console so you’re forced to use the screen several feet in front of you (there is, at least, a remote). Best to bring a tablet loaded with entertainment or a book.
Delta
7.9
Good
8,011 reviews
Delta
7.9
Good
8,011 reviews

Crew

8.5

Food

7.3

Comfort

7.9

Overall

7.9

Boarding

8.1

Entertainment

7.9

Reviews

1 / 20
6.0
Good

Jim,Nov 2025

AVL - ATL

The exit row seats without a seat in front are great for leg room but don’t have a fold out entertainment console so you’re forced to use the screen several feet in front of you (there is, at least, a remote). Best to bring a tablet loaded with entertainment or a book.
American Airlines
7.2
Good
11,047 reviews
Delta
7.9
Good
8,011 reviews

Crew

8.5

Food

7.3

Comfort

7.9

Overall

7.9

Boarding

8.1

Entertainment

7.9

Reviews

1 / 20
6.0
Good

Jim,Nov 2025

AVL - ATL

The exit row seats without a seat in front are great for leg room but don’t have a fold out entertainment console so you’re forced to use the screen several feet in front of you (there is, at least, a remote). Best to bring a tablet loaded with entertainment or a book.
JetBlue
7.2
Good
2,899 reviews
Delta
7.9
Good
8,011 reviews

Crew

8.5

Food

7.3

Comfort

7.9

Overall

7.9

Boarding

8.1

Entertainment

7.9

Reviews

1 / 20
6.0
Good

Jim,Nov 2025

AVL - ATL

The exit row seats without a seat in front are great for leg room but don’t have a fold out entertainment console so you’re forced to use the screen several feet in front of you (there is, at least, a remote). Best to bring a tablet loaded with entertainment or a book.
Spirit Airlines
6.3
Okay
8,157 reviews
Delta
7.9
Good
8,011 reviews

Crew

8.5

Food

7.3

Comfort

7.9

Overall

7.9

Boarding

8.1

Entertainment

7.9

Reviews

1 / 20
6.0
Good

Jim,Nov 2025

AVL - ATL

The exit row seats without a seat in front are great for leg room but don’t have a fold out entertainment console so you’re forced to use the screen several feet in front of you (there is, at least, a remote). Best to bring a tablet loaded with entertainment or a book.
Frontier
5.8
Fair
3,091 reviews
Delta
7.9
Good
8,011 reviews

Crew

8.5

Food

7.3

Comfort

7.9

Overall

7.9

Boarding

8.1

Entertainment

7.9

Reviews

1 / 20
6.0
Good

Jim,Nov 2025

AVL - ATL

The exit row seats without a seat in front are great for leg room but don’t have a fold out entertainment console so you’re forced to use the screen several feet in front of you (there is, at least, a remote). Best to bring a tablet loaded with entertainment or a book.

Related info for your journey

Find useful and relevant information for your journey from Boston to San Juan. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly from for flights from Boston to San Juan?

    If you book a flight to San Juan from Boston, you will be flying from Logan Intl, which is the city’s only airport. Boston Logan Intl (BOS) is located 2.6 mi from the center of Boston. There are 8 flights from Logan Intl to San Juan per day from 7 different airlines.

  • How long is the flight from Boston to San Juan?

    Spirit Airlines, Delta, and United Airlines can get you from Boston to San Juan in just under 6h 32m. Your travel time can differ by up to 10h 32m. Boston and San Juan are separated by a distance of 1678 mi. Both multi-stop and nonstop flights can be found to your destination and back.

  • What are the cheapest airlines flying from Boston to San Juan round-trip?

    According to our current data, Frontier ($74), Spirit Airlines ($79), and JetBlue ($124) offers the cheapest pricing from Boston to San Juan. You may be able to fly from Boston to San Juan for 75% less than the average price by searching for these airlines.

  • What are the cheapest airlines to fly from Boston to San Juan one-way?

    The cheapest airline one-way is Frontier, with whom users have recently found tickets for as low as $51. However, be on the lookout for offers from Spirit Airlines and American Airlines, as they are both options that can get you from Boston to San Juan for a low price.

  • What are the most reliable airlines from Boston to San Juan?

    The top 3 most reliable airlines when flying from Boston to San Juan are Hawaiian Airlines (79%), TAP AIR PORTUGAL (78%) and Delta (77%).

  • What are the cheapest flights from Boston to San Juan?

    The cheapest flight price from Boston to San Juan is $93. On average you can expect to pay $401. The most popular route, (Boston Logan Intl - San Juan Luis Munoz Marin Intl), can usually be booked for $107.

  • Can I find deals for flights from Boston to San Juan that include hotel bookings?

    Yes. In addition to deals on Boston to San Juan flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Boston to San Juan?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Boston to San Juan.

  • Can I find deals for business class flights from Boston to San Juan?

    Yes. Cheapflights offers flight deals from Boston to San Juan by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Boston to San Juan?

    Currently, February is the cheapest month in which you can book a flight from Boston to San Juan (average of $65). Flying from Boston to San Juan in September is currently the most expensive (average of $147). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

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Top 7 airlines flying from Boston to San Juan

Discover the top 7 airlines that operate flights from Boston to San Juan. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated December 4, 2025.
AirlineCheapestAverageFlexibilityOn-time
FrontierCheapest$87Average$196FlexibilityNo cancel feeOn-time62%
Spirit AirlinesCheapest$99Average$267FlexibilityNo cancel feeOn-time65%
JetBlueCheapest$124Average$533FlexibilityNo cancel feeOn-time62%
DeltaCheapest$148Average$330FlexibilityNo cancel feeOn-timeN/A
United AirlinesCheapest$194Average$373FlexibilityNo cancel feeOn-time69%
American AirlinesCheapest$288Average$480FlexibilityNo cancel feeOn-time71%
SouthwestCheapest$383Average$533FlexibilityNo cancel feeOn-time63%

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