San Juan

$88+ Cheap flights from Jacksonville (JAX) to San Juan

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 4/24. Fares are subject to change and may not be available on all flights or dates of travel.
JAX — SJU
4月 28 — 5月 51
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Cheapflights Tip: The best prices from Jacksonville to San Juan are usually found in August or April, booked 82 days in advance, depart on a Sunday or Monday and return on a Friday

Cheap flight deals from Jacksonville to San Juan

Cheapest flights from Jacksonville to San Juan
Explore the most affordable flight options available from Jacksonville to San Juan. Find the lowest fares from popular airlines and budget airlines, with prices last updated on 3月 29, 2026.

This Orbitz deal was found by Cheapflights users on 3/26. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Orbitz is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
金 5/13:27 pm
JAX
-
SJU
1 stop9h 02m
Frontier
日 5/31:59 am
SJU
-
JAX
1 stop18h 55m
Frontier
Deal found 3/26$186
This Frontier deal was found by Cheapflights users on 3/26. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Frontier is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
金 5/13:27 pm
JAX
-
SJU
1 stop9h 02m
Frontier
火 5/57:00 am
SJU
-
JAX
Nonstop3h 33m
Frontier
Deal found 3/26$187
This Super.com deal was found by Cheapflights users on 3/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Super.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
日 4/2612:08 pm
JAX
-
SJU
Nonstop3h 05m
Frontier
木 4/301:59 am
SJU
-
JAX
1 stop12h 33m
Frontier
Deal found 3/27$196
This Frontier deal was found by Cheapflights users on 3/26. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Frontier is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
火 4/2812:26 pm
JAX
-
SJU
Nonstop3h 05m
Frontier
木 5/76:30 am
SJU
-
JAX
1 stop14h 20m
Frontier
Deal found 3/26$197
This Frontier deal was found by Cheapflights users on 3/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Frontier is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
水 6/2411:20 am
JAX
-
SJU
Nonstop3h 09m
Frontier
日 6/287:00 am
SJU
-
JAX
Nonstop3h 25m
Frontier
Deal found 3/27$200
This Trip.com deal was found by Cheapflights users on 3/26. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Trip.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
金 5/13:27 pm
JAX
-
SJU
1 stop9h 02m
Frontier
土 5/21:59 am
SJU
-
JAX
1 stop11h 30m
Frontier
Deal found 3/26$201
This Booking.com deal was found by Cheapflights users on 3/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Booking.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
火 4/2812:26 pm
JAX
-
SJU
Nonstop3h 05m
Frontier
日 5/31:59 am
SJU
-
JAX
1 stop18h 55m
Frontier
Deal found 3/27$204
This Frontier deal was found by Cheapflights users on 3/26. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Frontier is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
木 4/309:32 am
JAX
-
SJU
1 stop8h 35m
Frontier
木 4/301:59 am
SJU
-
JAX
1 stop12h 33m
Frontier
Deal found 3/26$206
This Frontier deal was found by Cheapflights users on 3/26. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Frontier is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
金 4/173:27 pm
JAX
-
SJU
1 stop9h 02m
Frontier
木 4/237:45 am
SJU
-
JAX
Nonstop3h 38m
Frontier
Deal found 3/26$207
This Frontier deal was found by Cheapflights users on 3/26. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Frontier is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
木 4/309:32 am
JAX
-
SJU
1 stop8h 35m
Frontier
木 5/76:30 am
SJU
-
JAX
1 stop14h 20m
Frontier
Deal found 3/26$211
This Frontier deal was found by Cheapflights users on 3/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Frontier is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
木 4/309:32 am
JAX
-
SJU
1 stop8h 35m
Frontier
火 5/57:00 am
SJU
-
JAX
Nonstop3h 33m
Frontier
Deal found 3/27$212

Find flight deals from Jacksonville to San Juan

Discover tips and strategies to find the most affordable flight options for your journey from Jacksonville (JAX) to San Juan (PR1). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated 3月 29, 2026.

Round-trip from

$186
(Orbitz)

One-way from

$88
(Frontier)

Popular in

December

Cheapest in

August

Average price

$350
From Jacksonville to San Juan
One-way flight from Jacksonville to San Juan
Highest demand for flights based on searches. 10% potential increase in price ($36 potential increase over avg. RT price).
Cheapest flight prices on average. 2% potential price decrease ($8 potential savings vs. average RT price).
Average for round-trip flights in March 2026

Cheapflights Fare Finder

 
Customize your flight search to find flights from Jacksonville to San Juan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated 3月 29, 2026.
Use the filters below to find and compare flights from Jacksonville to San Juan that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

Cheapest round-trip
Quickest round-trip

JacksonvilleSan Juan

JAX - SJU

JAXSJU

Jacksonville

火 4/21

5:30 am-11:45 am

1 stop6h 15m

San Juan Luis Munoz Marin Intl

金 4/24

12:55 pm-6:54 pm

1 stop5h 59m

$297

JacksonvilleSan Juan

JAX - SJU

JAXSJU

Jacksonville

火 4/21

5:30 am-11:45 am

1 stop6h 15m

San Juan Luis Munoz Marin Intl

水 4/22

5:34 pm-11:59 pm

1 stop6h 25m

$297

JacksonvilleSan Juan

JAX - SJU

JAXSJU

Jacksonville

水 5/13

6:05 am-12:01 pm

1 stop5h 56m

San Juan Luis Munoz Marin Intl

水 5/20

6:15 am-2:43 pm

1 stop8h 28m

$308

JacksonvilleSan Juan

JAX - SJU

JAXSJU

Jacksonville

土 5/2

12:55 pm-11:40 pm

2 stops10h 45m

San Juan Luis Munoz Marin Intl

土 5/9

5:15 am-6:20 pm

1 stop13h 05m

$320

JacksonvilleSan Juan

JAX - SJU

JAXSJU

Jacksonville

土 5/9

6:05 am-12:01 pm

1 stop5h 56m

San Juan Luis Munoz Marin Intl

土 5/16

7:30 am-2:43 pm

1 stop7h 13m

$328

JacksonvilleSan Juan

JAX - SJU

JAXSJU

Jacksonville

土 4/25

12:55 pm-11:40 pm

2 stops10h 45m

San Juan Luis Munoz Marin Intl

土 5/2

9:40 am-9:15 pm

2 stops11h 35m

$373

JacksonvilleSan Juan

JAX - SJU

JAXSJU

Jacksonville

日 4/26

6:25 am-5:05 pm

2 stops10h 40m

San Juan Luis Munoz Marin Intl

金 5/1

5:05 am-4:20 pm

2 stops11h 15m

$373

JacksonvilleSan Juan

JAX - SJU

JAXSJU

Jacksonville

土 4/18

5:39 pm-11:12 pm

1 stop5h 33m

San Juan Luis Munoz Marin Intl

火 4/21

12:55 pm-10:50 pm

1 stop9h 55m

$380

JacksonvilleSan Juan

JAX - SJU

JAXSJU

Jacksonville

水 4/29

1:15 pm-11:40 pm

2 stops10h 25m

San Juan Luis Munoz Marin Intl

火 5/5

5:35 am-3:45 pm

2 stops10h 10m

$400

JacksonvilleSan Juan

JAX - SJU

JAXSJU

Jacksonville

木 4/23

5:00 pm-11:40 pm

1 stop6h 40m

San Juan Luis Munoz Marin Intl

月 5/4

5:05 am-2:45 pm

2 stops9h 40m

$405

Flights are sorted by cheapest round-trip flights first.

Deals found on 3/28

Showing 1-10 of 20 resultsSorted by cheapest first
1
2

Best time to book a flight from Jacksonville to San Juan

Have a flexible travel schedule? Discover the best time to fly to San Juan from Jacksonville with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Jacksonville to San Juan

How far ahead should I book a flight from Jacksonville to San Juan?

Use this chart to determine the optimal time to book a round-trip flight from Jacksonville to San Juan. Price data was last updated on March 13, 2026.

To ensure you get the cheapest price possible for a flight from Jacksonville to San Juan, you should look to book at least 33 days in advance of your intended travel date. The price of your flight may increase if you delay and leave booking until a week or so before departure.

What is the cheapest month to book a flight from Jacksonville to San Juan?

Currently, January is the cheapest month in which you can book a flight from Jacksonville to San Juan (average of $135). Flying from Jacksonville to San Juan in September is currently the most expensive (average of $239). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from JAX to SJU?

Find hourly flight availability from Jacksonville to San Juan. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated 3月 29, 2026.

One of the essential ways to save on airfare from Jacksonville to San Juan is to remain as flexible as possible. Flights that are in the afternoon tend to be the most expensive. A flight in the evening could potentially save you up to 17% on airfare.

What is the cheapest day to fly from Jacksonville to San Juan?

Use this chart to determine the cheapest time to fly round-trip from Jacksonville to San Juan. Price data was last updated on March 28, 2026.

Travelers seeking maximum savings on their Jacksonville to San Juan flight should consider departing on Sunday afternoons when fares are most often at their lowest. Monday at noon flights should be avoided if possible as fares are typically the most expensive at this time.

How much does it cost to fly round-trip from Jacksonville to San Juan?

Reviews of airlines servicing San Juan

Get insights into the airlines that provide service to San Juan. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to San Juan. Reviews last updated 3月 29, 2026.
Get a feel of what it's like to fly with Southwest,Delta, andJetBlue from Jacksonville to San Juan by reading reviews from past customers. Users have also rated airlines in terms of entertainment options, comfort, food, crew/service, and boarding process.

Food

7.0

Entertainment

7.5

Crew

8.6

Overall

8.0

Comfort

8.0

Boarding

8.1

Reviews

1 / 20
2.0
Mediocre

Dominic,Mar 2026

MCO - SMF

I had to try and sleep on the floor of the Austin airport. I spent 12 hours there. The airline policies were so poor, that a near violent argument broke out between the people in front of me and the flight attendants - making for a super stressful situation at 30,000 feet. Garbage airline choice by Kayak Garbage idea to book a flight with a layover. Next time I will pay for a quality booking myself, and somehow force the company to reimburse it.

Food

7.0

Entertainment

7.5

Crew

8.6

Overall

8.0

Comfort

8.0

Boarding

8.1

Reviews

1 / 20
2.0
Mediocre

Dominic,Mar 2026

MCO - SMF

I had to try and sleep on the floor of the Austin airport. I spent 12 hours there. The airline policies were so poor, that a near violent argument broke out between the people in front of me and the flight attendants - making for a super stressful situation at 30,000 feet. Garbage airline choice by Kayak Garbage idea to book a flight with a layover. Next time I will pay for a quality booking myself, and somehow force the company to reimburse it.

Food

7.0

Entertainment

7.5

Crew

8.6

Overall

8.0

Comfort

8.0

Boarding

8.1

Reviews

1 / 20
2.0
Mediocre

Dominic,Mar 2026

MCO - SMF

I had to try and sleep on the floor of the Austin airport. I spent 12 hours there. The airline policies were so poor, that a near violent argument broke out between the people in front of me and the flight attendants - making for a super stressful situation at 30,000 feet. Garbage airline choice by Kayak Garbage idea to book a flight with a layover. Next time I will pay for a quality booking myself, and somehow force the company to reimburse it.

Food

7.0

Entertainment

7.5

Crew

8.6

Overall

8.0

Comfort

8.0

Boarding

8.1

Reviews

1 / 20
2.0
Mediocre

Dominic,Mar 2026

MCO - SMF

I had to try and sleep on the floor of the Austin airport. I spent 12 hours there. The airline policies were so poor, that a near violent argument broke out between the people in front of me and the flight attendants - making for a super stressful situation at 30,000 feet. Garbage airline choice by Kayak Garbage idea to book a flight with a layover. Next time I will pay for a quality booking myself, and somehow force the company to reimburse it.

Food

7.0

Entertainment

7.5

Crew

8.6

Overall

8.0

Comfort

8.0

Boarding

8.1

Reviews

1 / 20
2.0
Mediocre

Dominic,Mar 2026

MCO - SMF

I had to try and sleep on the floor of the Austin airport. I spent 12 hours there. The airline policies were so poor, that a near violent argument broke out between the people in front of me and the flight attendants - making for a super stressful situation at 30,000 feet. Garbage airline choice by Kayak Garbage idea to book a flight with a layover. Next time I will pay for a quality booking myself, and somehow force the company to reimburse it.

Food

7.0

Entertainment

7.5

Crew

8.6

Overall

8.0

Comfort

8.0

Boarding

8.1

Reviews

1 / 20
2.0
Mediocre

Dominic,Mar 2026

MCO - SMF

I had to try and sleep on the floor of the Austin airport. I spent 12 hours there. The airline policies were so poor, that a near violent argument broke out between the people in front of me and the flight attendants - making for a super stressful situation at 30,000 feet. Garbage airline choice by Kayak Garbage idea to book a flight with a layover. Next time I will pay for a quality booking myself, and somehow force the company to reimburse it.

Related info for your journey

Find useful and relevant information for your journey from Jacksonville to San Juan. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.
  • What airport do you fly from for flights from Jacksonville to San Juan?

    For a flight from Jacksonville to San Juan, you will be flying from Jacksonville. Jacksonville (JAX) is just 11.2 mi from the center of the city. Jacksonville is the only Jacksonville airport and it handles 0 outbound flights to San Juan per day. 6 airlines have flights to San Juan from Jacksonville on a regular basis.

  • How long is the flight from Jacksonville to San Juan?

    Departing from Jacksonville to San Juan will take you 6h 15m. Airlines will cover a distance of 1287 mi. When browsing for deals, the options you’ll see will be for both nonstop flights and flights with stops.

  • What are the cheapest airlines flying from Jacksonville to San Juan round-trip?

    Delta, at $108, was found to be the cheapest airline from Jacksonville to San Juan.Alternate airlines to your destination round-trip include Frontier and JetBlue. You may be able to fly from Jacksonville to San Juan for 65% less than the average price by searching for these airlines.

  • What are the cheapest airlines to fly from Jacksonville to San Juan one-way?

    $67 is the cheapest one-way deal found within the past few days, from Frontier. You may also be able to find cheap deals on Southwest and JetBlue, with prices starting from $88 and $107, respectively.

  • What are the cheapest flights from Jacksonville to San Juan?

    Looking for the cheapest flight from Jacksonville to San Juan? While on average our users pay $230, our data indicates the cheapest price to be $101. The most popular route (Jacksonville - San Juan Luis Munoz Marin Intl), is priced around $108.

  • Can I find deals for flights from Jacksonville to San Juan that include hotel bookings?

    Yes. In addition to deals on Jacksonville to San Juan flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Jacksonville to San Juan?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Jacksonville to San Juan.

  • Can I find deals for business class flights from Jacksonville to San Juan?

    Yes. Cheapflights offers flight deals from Jacksonville to San Juan by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Jacksonville to San Juan?

    Currently, January is the cheapest month in which you can book a flight from Jacksonville to San Juan (average of $135). Flying from Jacksonville to San Juan in September is currently the most expensive (average of $239). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

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Top 6 airlines flying from Jacksonville to San Juan

Discover the top 6 airlines that operate flights from Jacksonville to San Juan. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated 3月 29, 2026.
AirlineCheapestAverageFlexibilityOn-time
DeltaCheapest$108Average$322FlexibilityNo cancel feeOn-timeN/A
FrontierCheapest$146Average$259FlexibilityNo cancel feeOn-time62%
JetBlueCheapest$178Average$315FlexibilityNo cancel feeOn-time62%
United AirlinesCheapest$208Average$459FlexibilityNo cancel feeOn-time69%
American AirlinesCheapest$233Average$397FlexibilityNo cancel feeOn-time71%
SouthwestCheapest$307Average$380FlexibilityNo cancel feeOn-time63%

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