$188+ Cheap flights from Fort Walton Beach, FL to San Juan
This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 9/21. Fares are subject to change and may not be available on all flights or dates of travel.
PNS — SJU
Sep 14 — Sep 211
Round-trip
1 adult, Economy
We work with more than 300 partners to bring you better travel deals
Find cheap flights from Fort Walton Beach to San Juan with Cheapflights
1. Tell us where you want to go
Enter your travel information like dates, passengers, trip type (one-way or round trip), and preferred cabin class then click “Find deals”2. Select your favorite providers
We find the providers serving your travel needs. Choose up to four travel providers to compare side-by-side for flights, hotels, or car rentals.3. Compare prices and book
Review each provider’s pricing and select the best option for you! Book through your favorite provider’s website for a seamless experience.Cheap flight deals from Fort Walton Beach to San Juan
Cheapest
Best
Last-minute
One-way
Cheapest flights from Fort Walton Beach to San JuanExplore the most affordable flight options available from Fort Walton Beach to San Juan. Find the lowest fares from popular airlines and budget airlines, with prices last updated on August 15, 2026.
Explore the most affordable flight options available from Fort Walton Beach to San Juan. Find the lowest fares from popular airlines and budget airlines, with prices last updated on August 15, 2026.
This Southwest deal was found by Cheapflights users on 8/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 10/202:15 pm -
1 stop7h 50m
Mon 10/266:00 am -
2 stops10h 50m
Deal found 8/11![Southwest logo]()
$357
This Southwest deal was found by Cheapflights users on 8/12. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 9/172:00 pm -
2 stops8h 55m
Mon 9/216:30 am -
2 stops9h 55m
Deal found 8/12![Southwest logo]()
$377
This Southwest deal was found by Cheapflights users on 8/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 10/912:35 pm -
2 stops9h 30m
Mon 10/125:30 am -
1 stop8h 40m
Deal found 8/11![Southwest logo]()
$406
This Southwest deal was found by Cheapflights users on 8/14. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 9/129:45 am -
2 stops11h 15m
Fri 9/185:30 am -
1 stop8h 45m
Deal found 8/14![Southwest logo]()
$419
This Southwest deal was found by Cheapflights users on 8/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 11/1210:25 am -
2 stops12h 30m
Mon 11/1610:45 am -
2 stops12h 30m
Deal found 8/11![Southwest logo]()
$441
This Delta deal was found by Cheapflights users on 8/13. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 12/17:00 am -
1 stop8h 25m
Tue 12/87:00 am -
1 stop6h 13m
Deal found 8/13![Delta logo]()
$495
This Delta deal was found by Cheapflights users on 8/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 10/216:00 am -
1 stop6h 49m
Mon 10/267:15 am -
1 stop7h 46m
Deal found 8/11![Delta logo]()
$526
This American Airlines deal was found by Cheapflights users on 8/12. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 12/104:41 pm -
2 stops15h 01m
Mon 12/146:55 pm -
1 stop7h 04m
Deal found 8/12![American Airlines logo]()
$527
This American Airlines deal was found by Cheapflights users on 8/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 9/196:09 pm -
2 stops15h 51m
Sun 9/274:38 pm -
1 stop8h 05m
Deal found 8/11![American Airlines logo]()
$545
Best flights from Fort Walton Beach to San JuanDiscover carefully curated flight deals from Fort Walton Beach to San Juan that have cost, travel time, and layovers in mind to ensure you get the best travel experience. Data last updated August 15, 2026.
Discover carefully curated flight deals from Fort Walton Beach to San Juan that have cost, travel time, and layovers in mind to ensure you get the best travel experience. Data last updated August 15, 2026.
This Southwest deal was found by Cheapflights users on 8/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 10/207:15 am -
2 stops12h 15m
Mon 10/266:00 am -
2 stops10h 50m
Deal found 8/11![Southwest logo]()
$357
This Delta deal was found by Cheapflights users on 8/13. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 12/17:00 am -
1 stop8h 25m
Tue 12/87:00 am -
1 stop6h 13m
Deal found 8/13![Delta logo]()
$495
This Southwest deal was found by Cheapflights users on 8/13. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 9/247:25 am -
2 stops11h 40m
Sun 9/275:00 am -
2 stops9h 20m
Deal found 8/13![Southwest logo]()
$377
This Southwest deal was found by Cheapflights users on 8/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 10/912:35 pm -
2 stops9h 30m
Mon 10/125:30 am -
1 stop8h 40m
Deal found 8/11![Southwest logo]()
$406
This Southwest deal was found by Cheapflights users on 8/14. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 10/282:15 pm -
1 stop7h 50m
Mon 11/26:05 am -
2 stops9h 20m
Deal found 8/14![Southwest logo]()
$419
This Delta deal was found by Cheapflights users on 8/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 1/219:25 am -
1 stop9h 35m
Thu 1/283:55 pm -
1 stop9h 12m
Deal found 8/11![Delta logo]()
$526
This Southwest deal was found by Cheapflights users on 8/14. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 9/127:25 am -
2 stops9h 45m
Fri 9/1811:35 am -
2 stops10h 25m
Deal found 8/14![Southwest logo]()
$419
This Delta deal was found by Cheapflights users on 8/14. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 10/286:00 am -
1 stop6h 49m
Mon 11/28:15 am -
1 stop7h 46m
Deal found 8/14![Delta logo]()
$526
This Southwest deal was found by Cheapflights users on 8/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 11/1210:25 am -
2 stops12h 30m
Mon 11/1610:45 am -
2 stops12h 30m
Deal found 8/11![Southwest logo]()
$441
Last-minute flights from Fort Walton Beach to San JuanDiscover last-minute flight deals from Fort Walton Beach to San Juan. Data last updated August 15, 2026 and is based on user searches.
Discover last-minute flight deals from Fort Walton Beach to San Juan. Data last updated August 15, 2026 and is based on user searches.
This Delta deal was found by Cheapflights users on 8/14. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 8/182:45 pm -
1 stop6h 44m
Thu 8/272:59 pm -
1 stop6h 54m
Deal found 8/14![Delta logo]()
$581
This Southwest deal was found by Cheapflights users on 8/14. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 8/187:15 am -
2 stops9h 55m
Thu 8/275:30 am -
1 stop8h 45m
Deal found 8/14![Southwest logo]()
$601
This Southwest deal was found by Cheapflights users on 8/15. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 8/2212:15 pm -
1 stop8h 40m
Sat 8/295:55 am -
1 stop9h 25m
Deal found 8/15![Southwest logo]()
$593
This American Airlines deal was found by Cheapflights users on 8/12. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 9/17:01 am -
1 stop6h 50m
Sun 9/1310:16 am -
1 stop14h 27m
Deal found 8/12![American Airlines logo]()
$563
This Southwest deal was found by Cheapflights users on 8/14. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 9/129:45 am -
2 stops11h 15m
Fri 9/185:30 am -
1 stop8h 45m
Deal found 8/14![Southwest logo]()
$419
This Southwest deal was found by Cheapflights users on 8/12. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 9/172:00 pm -
2 stops8h 55m
Mon 9/216:30 am -
2 stops9h 55m
Deal found 8/12![Southwest logo]()
$377
This American Airlines deal was found by Cheapflights users on 8/15. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 9/176:09 pm -
2 stops14h 15m
Mon 9/216:00 am -
2 stops16h 52m
Deal found 8/15![American Airlines logo]()
$585
This American Airlines deal was found by Cheapflights users on 8/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 9/196:09 pm -
2 stops15h 51m
Sun 9/274:38 pm -
1 stop8h 05m
Deal found 8/11![American Airlines logo]()
$545
One-way flights from Fort Walton Beach to San JuanSearch for one-way flight options from Fort Walton Beach to San Juan. Find affordable one-way fares based on user searches. Data last updated August 15, 2026.
Search for one-way flight options from Fort Walton Beach to San Juan. Find affordable one-way fares based on user searches. Data last updated August 15, 2026.
This Southwest deal was found by Cheapflights users on 8/12. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 9/212:00 pm -
2 stops8h 55m
Deal found 8/12![Southwest logo]()
$188
This American Airlines deal was found by Cheapflights users on 8/12. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 9/215:40 am -
1 stop7h 17m
Deal found 8/12![American Airlines logo]()
$282
Find flight deals from Fort Walton Beach to San Juan
Keep the following information in mind while searching for Fort Walton Beach to San Juan flight deals. Data was last updated August 15, 2026.
Round-trip from | $357 (Southwest) |
|---|---|
One-way from | $188 (Southwest) |
Popular in | January |
Cheapest in | September |
Cheapflights Fare Finder
Customize your flight search to find flights from Fort Walton Beach to San Juan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated August 15, 2026.
Use the filters below to find and compare flights from Fort Walton Beach to San Juan that are best for you.
Fly from
Fly to
Route
Depart
Return
Cheapest round-trip
ValparaisoSan Juan
VPS Valparaiso Destin-Ft Walton Beach - SJU San Juan Luis Munoz Marin Intl
VPSSJU
Valparaiso Destin-Ft Walton Beach
Tue 10/20
7:15 am-8:30 pm
2 stops12h 15m
San Juan Luis Munoz Marin Intl
Mon 10/26
6:00 am-3:50 pm
2 stops10h 50m
$357
ValparaisoSan Juan
VPS Valparaiso Destin-Ft Walton Beach - SJU San Juan Luis Munoz Marin Intl
VPSSJU
Valparaiso Destin-Ft Walton Beach
Thu 9/24
7:25 am-8:05 pm
2 stops11h 40m
San Juan Luis Munoz Marin Intl
Sun 9/27
5:00 am-1:20 pm
2 stops9h 20m
$377
ValparaisoSan Juan
VPS Valparaiso Destin-Ft Walton Beach - SJU San Juan Luis Munoz Marin Intl
VPSSJU
Valparaiso Destin-Ft Walton Beach
Fri 10/9
12:35 pm-11:05 pm
2 stops9h 30m
San Juan Luis Munoz Marin Intl
Mon 10/12
5:30 am-1:10 pm
1 stop8h 40m
$406
ValparaisoSan Juan
VPS Valparaiso Destin-Ft Walton Beach - SJU San Juan Luis Munoz Marin Intl
VPSSJU
Valparaiso Destin-Ft Walton Beach
Wed 10/28
2:15 pm-11:05 pm
1 stop7h 50m
San Juan Luis Munoz Marin Intl
Mon 11/2
6:05 am-1:25 pm
2 stops9h 20m
$419
ValparaisoSan Juan
VPS Valparaiso Destin-Ft Walton Beach - SJU San Juan Luis Munoz Marin Intl
VPSSJU
Valparaiso Destin-Ft Walton Beach
Sat 9/12
7:25 am-6:10 pm
2 stops9h 45m
San Juan Luis Munoz Marin Intl
Fri 9/18
11:35 am-9:00 pm
2 stops10h 25m
$419
ValparaisoSan Juan
VPS Valparaiso Destin-Ft Walton Beach - SJU San Juan Luis Munoz Marin Intl
VPSSJU
Valparaiso Destin-Ft Walton Beach
Thu 11/12
10:25 am-12:55 am
2 stops12h 30m
San Juan Luis Munoz Marin Intl
Mon 11/16
10:45 am-9:15 pm
2 stops12h 30m
$441
ValparaisoSan Juan
VPS Valparaiso Destin-Ft Walton Beach - SJU San Juan Luis Munoz Marin Intl
VPSSJU
Valparaiso Destin-Ft Walton Beach
Tue 12/1
7:00 am-5:25 pm
1 stop8h 25m
San Juan Luis Munoz Marin Intl
Tue 12/8
7:00 am-11:13 am
1 stop6h 13m
$495
ValparaisoSan Juan
VPS Valparaiso Destin-Ft Walton Beach - SJU San Juan Luis Munoz Marin Intl
VPSSJU
Valparaiso Destin-Ft Walton Beach
Thu 1/21
9:25 am-9:00 pm
1 stop9h 35m
San Juan Luis Munoz Marin Intl
Thu 1/28
3:55 pm-11:07 pm
1 stop9h 12m
$526
Quickest round-trip
ValparaisoSan Juan
VPS Valparaiso Destin-Ft Walton Beach - SJU San Juan Luis Munoz Marin Intl
VPSSJU
Valparaiso Destin-Ft Walton Beach
Wed 10/28
6:00 am-1:49 pm
1 stop6h 49m
San Juan Luis Munoz Marin Intl
Mon 11/2
8:15 am-2:01 pm
1 stop7h 46m
$526
Cheapest one-way
Quickest one-way
ValparaisoSan Juan
VPS Valparaiso Destin-Ft Walton Beach - SJU San Juan Luis Munoz Marin Intl
VPSSJU
Valparaiso Destin-Ft Walton Beach
Mon 9/21
2:00 pm-11:55 pm
2 stops8h 55m
$188
Sorted by cheapest first
Best time to book a flight from Fort Walton Beach to San Juan
Have a flexible travel schedule? Discover the best time to fly to San Juan from Fort Walton Beach with our price prediction graph.
VPS-SJU
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.
Cheapflights Insights
Everything you need to know about your flight from Fort Walton Beach to San Juan
FO9-PR1
VPS-SJU
No data available for this route at this time. Please check back soon.
Reviews of airlines servicing San Juan
Get insights into the airlines that provide service to San Juan. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to San Juan. Reviews last updated August 15, 2026.
Peruse reviews from past customers who have flown with Delta and American Airlines from Fort Walton Beach to San Juan to help guide your decision. You can also see how each airline stacks up in terms of entertainment options, comfort, food, crew/service, and boarding process.
Comfort
7.8
Entertainment
7.8
Crew
8.5
Food
7.2
Overall
7.8
Boarding
8.1
Reviews
1 / 20
6.0
Goodpilar,May 2025
RSW - ATL
Comfort
7.8
Entertainment
7.8
Crew
8.5
Food
7.2
Overall
7.8
Boarding
8.1
Reviews
1 / 20
6.0
Goodpilar,May 2025
RSW - ATL
Comfort
7.8
Entertainment
7.8
Crew
8.5
Food
7.2
Overall
7.8
Boarding
8.1
Reviews
1 / 20
6.0
Goodpilar,May 2025
RSW - ATL
Related info for your journey
Find useful and relevant information for your journey from Fort Walton Beach to San Juan. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.
Browse thousands of different options on Cheapflights for your next trip
Toggle through the tabs below to find thousands of options on Cheapflights for your next trip.
Alternative routes
Complete your trip
Flights by cabin class
Other flight options
Popular flights
Alternative routes for Fort Walton Beach to San Juan
See prices for flight routes from nearby airports that may be better suited for you.
Complete your trip
Complete your trip to San Juan by adding a car rental and/or hotel reservation to your travel itinerary.
Search flights from Fort Walton Beach to San Juan by cabin class
Find flights from Fort Walton Beach to San Juan, based on your preferred cabin class, be it economy, premium economy, business, or first class.
Fort Walton Beach and San Juan flights
Browse other Fort Walton Beach and San Juan flight options. Last updated on August 15, 2026.
Popular flight searches
Check out other popular destinations found by fellow travelers in 2026
Top 4 airlines flying from Fort Walton Beach to San Juan
Discover the top 4 airlines that operate flights from Fort Walton Beach to San Juan. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated August 15, 2026.
| Airline | Cheapest | Average | Flexibility | On-time |
|---|---|---|---|---|
| Cheapest$364 | Average$596 | FlexibilityNo cancel fee | On-timeN/A | |
| Cheapest$365 | Average$586 | FlexibilityNo cancel fee | On-time71% | |
| Cheapest$375 | Average$582 | FlexibilityNo cancel fee | On-time63% | |
| Cheapest$422 | Average$706 | FlexibilityNo cancel fee | On-time69% |