$126+ Cheap flights from San Diego (SAN) to Puerto Rico
This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 4/15. Fares are subject to change and may not be available on all flights or dates of travel.
SAN — SJU
Apr 1 — Apr 81
1 adult, Economy
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Find cheap flights from San Diego to Puerto Rico with Cheapflights
1. Tell us where you want to go
Enter your travel information like dates, passengers, trip type (one-way or round trip), and preferred cabin class then click “Find deals”2. Select your favorite providers
We find the providers serving your travel needs. Choose up to four travel providers to compare side-by-side for flights, hotels, or car rentals.3. Compare prices and book
Review each provider’s pricing and select the best option for you! Book through your favorite provider’s website for a seamless experience.Cheap flight deals from San Diego to Puerto Rico
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Cheapest flights from San Diego to Puerto RicoExplore the most affordable flight options available from San Diego to Puerto Rico. Find the lowest fares from popular airlines and budget airlines, with prices last updated on March 2, 2026.
Explore the most affordable flight options available from San Diego to Puerto Rico. Find the lowest fares from popular airlines and budget airlines, with prices last updated on March 2, 2026.
This Kiwi.com deal was found by Cheapflights users on 3/2. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 4/96:45 am
SAN
- SJU
2 stops14h 20m
Multiple Airlines
Fri 4/175:45 am
SJU
- SAN
1 stop20h 44m
Multiple Airlines
Deal found 3/2![Multiple Airlines logo]()
$361
This Southwest deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 4/86:20 am
SAN
- SJU
1 stop13h 20m
Southwest
Wed 4/1511:25 am
SJU
- SAN
2 stops13h 05m
Southwest
Deal found 3/1![Southwest logo]()
$362
This Kiwi.com deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 4/66:45 am
SAN
- SJU
1 stop25h 22m
Multiple Airlines
Mon 4/133:08 am
SJU
- SAN
2 stops22h 58m
Multiple Airlines
Deal found 3/1![Multiple Airlines logo]()
$363
This American Airlines deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 5/56:30 am
SAN
- SJU
2 stops11h 21m
American Airlines
Mon 5/1111:59 pm
SJU
- SAN
1 stop11h 16m
American Airlines
Deal found 3/1![American Airlines logo]()
$364
This Kiwi.com deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 4/109:28 pm
SAN
- SJU
2 stops24h 23m
Multiple Airlines
Fri 4/175:45 am
SJU
- SAN
1 stop20h 44m
Multiple Airlines
Deal found 3/1![Multiple Airlines logo]()
$366
This Kiwi.com deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 4/109:28 pm
SAN
- SJU
2 stops24h 23m
Multiple Airlines
Thu 4/165:45 am
SJU
- SAN
1 stop21h 26m
Multiple Airlines
Deal found 3/1![Multiple Airlines logo]()
$367
This Kiwi.com deal was found by Cheapflights users on 2/26. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 4/136:45 am
SAN
- SJU
1 stop25h 22m
Multiple Airlines
Thu 4/161:55 pm
SJU
- SAN
2 stops21h 39m
Multiple Airlines
Deal found 2/26![Multiple Airlines logo]()
$368
This Kiwi.com deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 4/96:45 am
SAN
- SJU
2 stops14h 20m
Multiple Airlines
Thu 4/165:45 am
SJU
- SAN
1 stop21h 26m
Multiple Airlines
Deal found 3/1![Multiple Airlines logo]()
$369
This Kiwi.com deal was found by Cheapflights users on 3/2. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 4/126:45 am
SAN
- SJU
1 stop25h 22m
Multiple Airlines
Fri 4/177:17 pm
SJU
- SAN
2 stops40h 17m
Multiple Airlines
Deal found 3/2![Multiple Airlines logo]()
$370
This Kiwi.com deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 4/712:00 pm
SAN
- SJU
2 stops33h 29m
Multiple Airlines
Fri 4/175:45 am
SJU
- SAN
1 stop20h 44m
Multiple Airlines
Deal found 3/1![Multiple Airlines logo]()
$372
This Kiwi.com deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 4/66:45 am
SAN
- SJU
1 stop25h 22m
Multiple Airlines
Wed 4/156:30 am
SJU
- SAN
2 stops29h 04m
Multiple Airlines
Deal found 3/1![Multiple Airlines logo]()
$373
This Priceline deal was found by Cheapflights users on 2/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Priceline is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 4/279:15 pm
SAN
- BQN
1 stop25h 21m
JetBlue
Fri 5/15:01 am
BQN
- SAN
1 stop18h 03m
JetBlue
Deal found 2/27![JetBlue logo]()
$446
Best flights from San Diego to Puerto RicoDiscover carefully curated flight deals from San Diego to Puerto Rico that have cost, travel time, and layovers in mind to ensure you get the best travel experience. Data last updated March 2, 2026.
Discover carefully curated flight deals from San Diego to Puerto Rico that have cost, travel time, and layovers in mind to ensure you get the best travel experience. Data last updated March 2, 2026.
This Delta deal was found by Cheapflights users on 2/26. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 5/2310:15 pm
SAN
- SJU
1 stop11h 56m
Delta
Thu 5/282:25 pm
SJU
- SAN
1 stop10h 35m
Delta
Deal found 2/26![Delta logo]()
$405
This United Airlines deal was found by Cheapflights users on 2/28. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 5/3010:30 pm
SAN
- SJU
1 stop10h 34m
United Airlines
Thu 6/41:00 am
SJU
- SAN
1 stop11h 21m
United Airlines
Deal found 2/28![United Airlines logo]()
$416
This Southwest deal was found by Cheapflights users on 2/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 3/2310:40 pm
SAN
- SJU
1 stop11h 35m
Southwest
Sat 3/288:50 pm
SJU
- SAN
1 stop16h 00m
Southwest
Deal found 2/27![Southwest logo]()
$585
This United Airlines deal was found by Cheapflights users on 2/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 5/187:00 pm
SAN
- SJU
2 stops14h 04m
United Airlines
Tue 6/21:00 am
SJU
- SAN
1 stop11h 21m
United Airlines
Deal found 2/27![United Airlines logo]()
$416
This United Airlines deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 4/207:14 pm
SAN
- SJU
2 stops15h 31m
United Airlines
Fri 4/247:00 am
SJU
- SAN
1 stop9h 51m
United Airlines
Deal found 3/1![United Airlines logo]()
$417
This Delta deal was found by Cheapflights users on 2/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 5/187:10 pm
SAN
- SJU
2 stops15h 01m
Delta
Tue 5/262:25 pm
SJU
- SAN
1 stop10h 35m
Delta
Deal found 2/27![Delta logo]()
$461
This United Airlines deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 5/206:20 am
SAN
- BQN
2 stops13h 49m
United Airlines
Tue 6/212:15 am
BQN
- SAN
2 stops14h 36m
United Airlines
Deal found 3/1![United Airlines logo]()
$461
This Delta deal was found by Cheapflights users on 2/28. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 5/36:25 am
SAN
- SJU
2 stops13h 48m
Delta
Sun 5/102:25 pm
SJU
- SAN
2 stops12h 16m
Delta
Deal found 2/28![Delta logo]()
$515
This Orbitz deal was found by Cheapflights users on 2/26. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Orbitz is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 3/268:59 pm
SAN
- PSE
2 stops24h 41m
JetBlue
Thu 4/27:59 pm
PSE
- SAN
2 stops20h 58m
JetBlue
Deal found 2/26![JetBlue logo]()
$1,248
This United Airlines deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 4/256:20 am
SAN
- SJU
2 stops11h 18m
United Airlines
Sat 4/251:00 am
SJU
- SAN
1 stop11h 40m
United Airlines
Deal found 3/1![United Airlines logo]()
$476
This United Airlines deal was found by Cheapflights users on 2/26. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 4/146:20 am
SAN
- SJU
2 stops11h 18m
United Airlines
Sat 4/181:00 am
SJU
- SAN
2 stops13h 25m
United Airlines
Deal found 2/26![United Airlines logo]()
$563
This United Airlines deal was found by Cheapflights users on 2/26. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 3/76:30 am
SAN
- SJU
2 stops14h 06m
United Airlines
Thu 3/121:05 am
SJU
- SAN
1 stop12h 15m
United Airlines
Deal found 2/26![United Airlines logo]()
$570
This United Airlines deal was found by Cheapflights users on 2/26. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 5/2312:33 pm
SAN
- SJU
2 stops13h 56m
United Airlines
Wed 5/272:05 am
SJU
- SAN
2 stops17h 02m
United Airlines
Deal found 2/26![United Airlines logo]()
$574
This United Airlines deal was found by Cheapflights users on 2/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 4/167:14 pm
SAN
- SJU
2 stops13h 50m
United Airlines
Tue 4/217:00 am
SJU
- SAN
2 stops13h 16m
United Airlines
Deal found 2/27![United Airlines logo]()
$663
This United Airlines deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 4/76:15 am
SAN
- BQN
2 stops13h 54m
United Airlines
Mon 4/1312:15 am
BQN
- SAN
1 stop12h 25m
United Airlines
Deal found 3/1![United Airlines logo]()
$732
This United Airlines deal was found by Cheapflights users on 2/28. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 5/316:40 am
SAN
- BQN
1 stop13h 29m
United Airlines
Sun 6/712:15 am
BQN
- SAN
1 stop12h 06m
United Airlines
Deal found 2/28![United Airlines logo]()
$741
This United Airlines deal was found by Cheapflights users on 2/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 3/127:05 am
SAN
- BQN
1 stop12h 52m
United Airlines
Mon 3/1612:09 am
BQN
- SAN
1 stop13h 11m
United Airlines
Deal found 2/27![United Airlines logo]()
$756
This United Airlines deal was found by Cheapflights users on 2/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 3/107:00 am
SAN
- BQN
2 stops12h 57m
United Airlines
Mon 3/1612:09 am
BQN
- SAN
3 stops23h 44m
United Airlines
Deal found 2/27![United Airlines logo]()
$810
This United Airlines deal was found by Cheapflights users on 2/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 3/107:00 am
SAN
- BQN
2 stops12h 57m
United Airlines
Tue 3/1712:09 am
BQN
- SAN
2 stops22h 39m
United Airlines
Deal found 2/27![United Airlines logo]()
$810
This United Airlines deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 4/1010:30 pm
SAN
- BQN
2 stops21h 39m
United Airlines
Tue 4/1412:15 am
BQN
- SAN
2 stops20h 01m
United Airlines
Deal found 3/1![United Airlines logo]()
$849
This United Airlines deal was found by Cheapflights users on 2/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 3/95:55 pm
SAN
- BQN
2 stops26h 02m
United Airlines
Wed 3/1812:09 am
BQN
- SAN
2 stops18h 30m
United Airlines
Deal found 2/27![United Airlines logo]()
$960
This United Airlines deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 3/1010:30 pm
SAN
- CPX
2 stops14h 43m
United Airlines
Fri 3/1310:30 am
CPX
- SAN
2 stops13h 33m
United Airlines
Deal found 3/1![United Airlines logo]()
$3,920
Last-minute flights from San Diego to Puerto RicoDiscover last-minute flight deals from San Diego to Puerto Rico. Data last updated March 2, 2026 and is based on user searches.
Discover last-minute flight deals from San Diego to Puerto Rico. Data last updated March 2, 2026 and is based on user searches.
This Kiwi.com deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 4/66:45 am
SAN
- SJU
1 stop25h 22m
Multiple Airlines
Mon 4/133:08 am
SJU
- SAN
2 stops22h 58m
Multiple Airlines
Deal found 3/1![Multiple Airlines logo]()
$363
This Kiwi.com deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 4/66:45 am
SAN
- SJU
1 stop25h 22m
Multiple Airlines
Wed 4/156:30 am
SJU
- SAN
2 stops29h 04m
Multiple Airlines
Deal found 3/1![Multiple Airlines logo]()
$373
This Kiwi.com deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 4/712:00 pm
SAN
- SJU
2 stops33h 29m
Multiple Airlines
Fri 4/175:45 am
SJU
- SAN
1 stop20h 44m
Multiple Airlines
Deal found 3/1![Multiple Airlines logo]()
$372
This Southwest deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 4/86:20 am
SAN
- SJU
1 stop13h 20m
Southwest
Wed 4/1511:25 am
SJU
- SAN
2 stops13h 05m
Southwest
Deal found 3/1![Southwest logo]()
$362
This Kiwi.com deal was found by Cheapflights users on 3/2. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 4/96:45 am
SAN
- SJU
2 stops14h 20m
Multiple Airlines
Fri 4/175:45 am
SJU
- SAN
1 stop20h 44m
Multiple Airlines
Deal found 3/2![Multiple Airlines logo]()
$361
This Kiwi.com deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 4/96:45 am
SAN
- SJU
2 stops14h 20m
Multiple Airlines
Thu 4/165:45 am
SJU
- SAN
1 stop21h 26m
Multiple Airlines
Deal found 3/1![Multiple Airlines logo]()
$369
This Kiwi.com deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 4/109:28 pm
SAN
- SJU
2 stops24h 23m
Multiple Airlines
Fri 4/175:45 am
SJU
- SAN
1 stop20h 44m
Multiple Airlines
Deal found 3/1![Multiple Airlines logo]()
$366
This Kiwi.com deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 4/109:28 pm
SAN
- SJU
2 stops24h 23m
Multiple Airlines
Thu 4/165:45 am
SJU
- SAN
1 stop21h 26m
Multiple Airlines
Deal found 3/1![Multiple Airlines logo]()
$367
This Kiwi.com deal was found by Cheapflights users on 3/2. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 4/126:45 am
SAN
- SJU
1 stop25h 22m
Multiple Airlines
Fri 4/177:17 pm
SJU
- SAN
2 stops40h 17m
Multiple Airlines
Deal found 3/2![Multiple Airlines logo]()
$370
This Kiwi.com deal was found by Cheapflights users on 2/26. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 4/136:45 am
SAN
- SJU
1 stop25h 22m
Multiple Airlines
Thu 4/161:55 pm
SJU
- SAN
2 stops21h 39m
Multiple Airlines
Deal found 2/26![Multiple Airlines logo]()
$368
This Kiwi.com deal was found by Cheapflights users on 3/2. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 4/167:52 am
SAN
- SJU
1 stop12h 18m
Multiple Airlines
Mon 4/207:15 am
SJU
- SAN
2 stops39h 49m
Multiple Airlines
Deal found 3/2![Multiple Airlines logo]()
$374
This Priceline deal was found by Cheapflights users on 2/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Priceline is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 4/279:15 pm
SAN
- BQN
1 stop25h 21m
JetBlue
Fri 5/15:01 am
BQN
- SAN
1 stop18h 03m
JetBlue
Deal found 2/27![JetBlue logo]()
$446
One-way flights from San Diego to Puerto RicoSearch for one-way flight options from San Diego to Puerto Rico. Find affordable one-way fares based on user searches. Data last updated March 2, 2026.
Search for one-way flight options from San Diego to Puerto Rico. Find affordable one-way fares based on user searches. Data last updated March 2, 2026.
This Southwest deal was found by Cheapflights users on 2/26. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 4/156:20 am
SAN
- SJU
1 stop13h 20m
Southwest
Deal found 2/26![Southwest logo]()
$126
This American Airlines deal was found by Cheapflights users on 2/26. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 4/279:45 pm
SAN
- SJU
1 stop11h 18m
American Airlines
Deal found 2/26![American Airlines logo]()
$130
This United Airlines deal was found by Cheapflights users on 2/26. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 4/76:15 am
SAN
- SJU
1 stop11h 23m
United Airlines
Deal found 2/26![United Airlines logo]()
$149
This United Airlines deal was found by Cheapflights users on 2/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 5/168:45 pm
SAN
- SJU
2 stops15h 57m
United Airlines
Deal found 2/27![United Airlines logo]()
$150
This Kiwi.com deal was found by Cheapflights users on 2/26. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 4/712:00 pm
SAN
- SJU
2 stops32h 58m
Multiple Airlines
Deal found 2/26![Multiple Airlines logo]()
$155
This Delta deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 4/2710:10 pm
SAN
- SJU
1 stop11h 42m
Delta
Deal found 3/1![Delta logo]()
$163
This Kiwi.com deal was found by Cheapflights users on 2/26. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 4/1510:30 am
SAN
- SJU
2 stops28h 29m
Frontier
Deal found 2/26![Frontier logo]()
$165
This United Airlines deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 4/277:14 pm
SAN
- SJU
2 stops13h 50m
United Airlines
Deal found 3/1![United Airlines logo]()
$171
This Trip.com deal was found by Cheapflights users on 2/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Trip.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 3/306:25 am
SAN
- SJU
2 stops24h 32m
Frontier
Deal found 2/27![Frontier logo]()
$173
This KAYAK deal was found by Cheapflights users on 2/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure KAYAK is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 5/308:45 pm
SAN
- SJU
1 stop12h 17m
JetBlue
Deal found 2/27![JetBlue logo]()
$183
This Kiwi.com deal was found by Cheapflights users on 3/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 5/39:00 pm
SAN
- SJU
3 stops38h 06m
Multiple Airlines
Deal found 3/1![Multiple Airlines logo]()
$185
Find flight deals from San Diego to Puerto Rico
Keep the following information in mind while searching for San Diego to Puerto Rico flight deals. Data was last updated March 2, 2026.
Round-trip from | $361 (Kiwi.com) |
|---|---|
One-way from | $126 (Southwest) |
Popular in | December |
Cheapest in | October |
Average price | $562 |
Cheapflights Fare Finder
Customize your flight search to find flights from San Diego to Puerto Rico that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated March 2, 2026.
Use the filters below to find and compare flights from San Diego to Puerto Rico that are best for you.
Fly from
Fly to
Route
Depart
Return
San DiegoSan Juan
SAN - SJU
SANSJU
San Diego
Sat 5/23
10:15 pm-1:11 pm
1 stop11h 56m
San Juan Luis Munoz Marin Intl
Thu 5/28
2:25 pm-10:00 pm
1 stop10h 35m
$405
San DiegoSan Juan
SAN - SJU
SANSJU
San Diego
Sat 5/30
10:30 pm-12:04 pm
1 stop10h 34m
San Juan Luis Munoz Marin Intl
Thu 6/4
1:00 am-9:21 am
1 stop11h 21m
$416
San DiegoSan Juan
SAN - SJU
SANSJU
San Diego
Mon 5/18
7:00 pm-12:04 pm
2 stops14h 04m
San Juan Luis Munoz Marin Intl
Tue 6/2
1:00 am-9:21 am
1 stop11h 21m
$416
San DiegoSan Juan
SAN - SJU
SANSJU
San Diego
Mon 4/20
7:14 pm-1:45 pm
2 stops15h 31m
San Juan Luis Munoz Marin Intl
Fri 4/24
7:00 am-1:51 pm
1 stop9h 51m
$417
San DiegoSan Juan
SAN - SJU
SANSJU
San Diego
Mon 5/18
7:10 pm-1:11 pm
2 stops15h 01m
San Juan Luis Munoz Marin Intl
Tue 5/26
2:25 pm-10:00 pm
1 stop10h 35m
$461
San DiegoAguadilla
SAN - BQN
SANBQN
San Diego
Wed 5/20
6:20 am-11:09 pm
2 stops13h 49m
Aguadilla Borinquen
Tue 6/2
12:15 am-11:51 am
2 stops14h 36m
$461
San DiegoSan Juan
SAN - SJU
SANSJU
San Diego
Sat 4/25
6:20 am-8:38 pm
2 stops11h 18m
San Juan Luis Munoz Marin Intl
Sat 4/25
1:00 am-9:40 am
1 stop11h 40m
$476
San DiegoSan Juan
SAN - SJU
SANSJU
San Diego
Sun 5/3
6:25 am-11:13 pm
2 stops13h 48m
San Juan Luis Munoz Marin Intl
Sun 5/10
2:25 pm-11:41 pm
2 stops12h 16m
$515
San DiegoSan Juan
SAN - SJU
SANSJU
San Diego
Tue 4/14
6:20 am-8:38 pm
2 stops11h 18m
San Juan Luis Munoz Marin Intl
Sat 4/18
1:00 am-11:25 am
2 stops13h 25m
$563
San DiegoSan Juan
SAN - SJU
SANSJU
San Diego
Sat 3/7
6:30 am-12:36 am
2 stops14h 06m
San Juan Luis Munoz Marin Intl
Thu 3/12
1:05 am-10:20 am
1 stop12h 15m
$570
Showing 1-10 of 31 resultsSorted by cheapest first
Best time to book a flight from San Diego to Puerto Rico
Have a flexible travel schedule? Discover the best time to fly to Puerto Rico from San Diego with our price prediction graph.
SAN-SJU
SAN-BQN
SAN-PSE
SAN-CPX
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.
Cheapflights Insights
Everything you need to know about your flight from San Diego to Puerto Rico
SAN-PR0
SAN-SJU
SAN-BQN
SAN-PSE
SAN-CPX
What is the cheapest month to book a flight from San Diego to Puerto Rico?
Currently, April is the cheapest month in which you can book a flight from San Diego to Puerto Rico (average of $159). Flying from San Diego to Puerto Rico in July is currently the most expensive (average of $352). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.
Reviews of airlines servicing Puerto Rico
Get insights into the airlines that provide service to Puerto Rico. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Puerto Rico. Reviews last updated March 2, 2026.
Read reviews from past customers who have flown Alaska Airlines, Southwest, and Delta from San Diego to Puerto Rico. Users can see the overall rating for each airline as well as how each is rated in terms of entertainment options, comfort, food, crew/service, and boarding process.
Boarding
8.1
Crew
8.5
Food
7.1
Entertainment
7.0
Comfort
7.8
Overall
8.0
Reviews
1 / 20
10.0
ExcellentAnonymous,Jan 2026
STS - LAX
Boarding
8.1
Crew
8.5
Food
7.1
Entertainment
7.0
Comfort
7.8
Overall
8.0
Reviews
1 / 20
10.0
ExcellentAnonymous,Jan 2026
STS - LAX
Boarding
8.1
Crew
8.5
Food
7.1
Entertainment
7.0
Comfort
7.8
Overall
8.0
Reviews
1 / 20
10.0
ExcellentAnonymous,Jan 2026
STS - LAX
Boarding
8.1
Crew
8.5
Food
7.1
Entertainment
7.0
Comfort
7.8
Overall
8.0
Reviews
1 / 20
10.0
ExcellentAnonymous,Jan 2026
STS - LAX
Boarding
8.1
Crew
8.5
Food
7.1
Entertainment
7.0
Comfort
7.8
Overall
8.0
Reviews
1 / 20
10.0
ExcellentAnonymous,Jan 2026
STS - LAX
Boarding
8.1
Crew
8.5
Food
7.1
Entertainment
7.0
Comfort
7.8
Overall
8.0
Reviews
1 / 20
10.0
ExcellentAnonymous,Jan 2026
STS - LAX
Related info for your journey
Find useful and relevant information for your journey from San Diego to Puerto Rico. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.
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Alternative routes for San Diego to Puerto Rico
See prices for flight routes from nearby airports that may be better suited for you.
Complete your trip
Complete your trip to Puerto Rico by adding a car rental and/or hotel reservation to your travel itinerary.
Search flights from San Diego to Puerto Rico by cabin class
Find flights from San Diego to Puerto Rico, based on your preferred cabin class, be it economy, premium economy, business, or first class.
San Diego and Puerto Rico flights
Browse other San Diego and Puerto Rico flight options. Last updated on March 2, 2026.
Popular flight searches
Check out other popular destinations found by fellow travelers in 2026
San Diego to Puerto Rico flights
Consider these flights traveling from San Diego to Puerto Rico.
Top 8 airlines flying from San Diego to Puerto Rico
Discover the top 8 airlines that operate flights from San Diego to Puerto Rico. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated March 2, 2026.
| Airline | Cheapest | Average | Flexibility | On-time |
|---|---|---|---|---|
| Cheapest$176 | Average$520 | FlexibilityNo cancel fee | On-timeN/A | |
| Cheapest$182 | Average$476 | FlexibilityNo cancel fee | On-time69% | |
| Cheapest$214 | Average$540 | FlexibilityNo cancel fee | On-time62% | |
| Cheapest$215 | Average$453 | FlexibilityNo cancel fee | On-time62% | |
| Cheapest$260 | Average$387 | FlexibilityNo cancel fee | On-time65% | |
| Cheapest$322 | Average$527 | FlexibilityNo cancel fee | On-time71% | |
| Cheapest$382 | Average$583 | FlexibilityNo cancel fee | On-time63% | |
| Cheapest$448 | Average$585 | FlexibilityNo cancel fee | On-time75% |