San Juan

$139+ Cheap flights from San Jose, CA (SJC) to San Juan

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 8/17. Fares are subject to change and may not be available on all flights or dates of travel.
SJC — SJU
Jul 13 — Jul 201
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Cheap flight deals from San Jose to San Juan

Cheapest flights from San Jose to San Juan
Explore the most affordable flight options available from San Jose to San Juan. Find the lowest fares from popular airlines and budget airlines, with prices last updated on June 13, 2026.

This American Airlines deal was found by Cheapflights users on 6/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 8/242:30 pm
SJC
-
SJU
2 stops19h 10m
American Airlines
Mon 8/3110:33 am
SJU
-
SJC
2 stops14h 59m
American Airlines
Deal found 6/10$379
This Delta deal was found by Cheapflights users on 6/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 10/236:12 pm
SJC
-
SJU
2 stops14h 24m
Delta
Sat 10/317:30 am
SJU
-
SJC
2 stops11h 46m
Delta
Deal found 6/8$386
This Southwest deal was found by Cheapflights users on 6/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 10/239:45 pm
SJC
-
SJU
1 stop11h 55m
Southwest
Sat 10/315:30 am
SJU
-
SJC
1 stop12h 15m
Southwest
Deal found 6/8$391
This Southwest deal was found by Cheapflights users on 6/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 9/1810:30 pm
SJC
-
SJU
1 stop11h 40m
Southwest
Mon 9/215:00 am
SJU
-
SJC
2 stops11h 35m
Southwest
Deal found 6/10$396
This Southwest deal was found by Cheapflights users on 6/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 8/218:00 pm
SJC
-
SJU
2 stops11h 50m
Southwest
Tue 8/2510:30 am
SJU
-
SJC
2 stops12h 45m
Southwest
Deal found 6/10$406
This Delta deal was found by Cheapflights users on 6/12. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 11/66:12 pm
SJC
-
SJU
2 stops14h 24m
Delta
Wed 11/117:00 am
SJU
-
SJC
2 stops18h 47m
Delta
Deal found 6/12$427
This Southwest deal was found by Cheapflights users on 6/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 8/2410:30 pm
SJC
-
SJU
1 stop11h 20m
Southwest
Mon 8/315:30 am
SJU
-
SJC
1 stop10h 30m
Southwest
Deal found 6/10$432
This Southwest deal was found by Cheapflights users on 6/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 9/26:30 am
SJC
-
SJU
2 stops11h 35m
Southwest
Tue 9/810:30 am
SJU
-
SJC
2 stops13h 00m
Southwest
Deal found 6/8$446
This Southwest deal was found by Cheapflights users on 6/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 8/108:00 pm
SJC
-
SJU
2 stops12h 00m
Southwest
Mon 8/175:30 am
SJU
-
SJC
1 stop10h 30m
Southwest
Deal found 6/11$447

Find flight deals from San Jose to San Juan

Discover tips and strategies to find the most affordable flight options for your journey from San Jose (SJC) to San Juan (PR1). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated June 13, 2026.

Round-trip from

$379
(American Airlines)

One-way from

$139
(American Airlines)

Popular in

November

Cheapest in

September

Average price

$756
From San Jose to San Juan
One-way flight from San Jose to San Juan
Highest demand for flights based on searches. 21% potential increase in price ($148 potential increase over avg. RT price).
Cheapest flight prices on average. 4% potential price decrease ($21 potential savings vs. average RT price).
Average for round-trip flights in June 2026

Cheapflights Fare Finder

 
Customize your flight search to find flights from San Jose to San Juan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated June 13, 2026.
Use the filters below to find and compare flights from San Jose to San Juan that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

Cheapest round-trip

San JoseSan Juan

SJC - SJU

SJCSJU

San Jose

Fri 8/21

7:35 pm-9:25 am

2 stops10h 50m

San Juan Luis Munoz Marin Intl

Tue 8/25

6:00 am-6:20 pm

1 stop15h 20m

$426

San JoseSan Juan

SJC - SJU

SJCSJU

San Jose

Thu 7/23

9:20 am-12:35 am

1 stop12h 15m

San Juan Luis Munoz Marin Intl

Mon 7/27

10:20 pm-12:55 pm

2 stops17h 35m

$634

San JoseSan Juan

SJC - SJU

SJCSJU

San Jose

Mon 8/24

6:37 pm-12:54 pm

2 stops15h 17m

San Juan Luis Munoz Marin Intl

Wed 8/26

3:56 pm-11:46 am

1 stop22h 50m

$655
Quickest round-trip

San JoseSan Juan

SJC - SJU

SJCSJU

San Jose

Fri 7/3

8:20 pm-10:45 am

2 stops11h 25m

San Juan Luis Munoz Marin Intl

Fri 7/10

5:00 am-2:05 pm

2 stops12h 05m

$662

San JoseSan Juan

SJC - SJU

SJCSJU

San Jose

Fri 7/3

6:01 am-9:43 pm

1 stop12h 42m

San Juan Luis Munoz Marin Intl

Sat 7/11

12:58 am-10:49 am

1 stop12h 51m

$766

San JoseSan Juan

SJC - SJU

SJCSJU

San Jose

Fri 7/3

6:01 am-11:50 pm

1 stop14h 49m

San Juan Luis Munoz Marin Intl

Mon 7/13

12:58 am-1:33 pm

1 stop15h 35m

$766

San JoseSan Juan

SJC - SJU

SJCSJU

San Jose

Wed 7/15

11:47 am-4:39 am

1 stop13h 52m

San Juan Luis Munoz Marin Intl

Tue 7/21

12:58 am-10:49 am

1 stop12h 51m

$771
Cheapest one-way

San JoseSan Juan

SJC - SJU

SJCSJU

San Jose

Mon 8/17

6:37 pm-12:54 pm

2 stops15h 17m

$176

San JoseSan Juan

SJC - SJU

SJCSJU

San Jose

Mon 8/24

5:12 pm-11:46 am

2 stops15h 34m

$193

San JoseSan Juan

SJC - SJU

SJCSJU

San Jose

Mon 8/17

4:30 pm-1:42 pm

2 stops18h 12m

$193

Flights are sorted by cheapest round-trip flights first.

Deals found on 6/10

Showing 1-10 of 14 resultsSorted by cheapest first
1
2

Best time to book a flight from San Jose to San Juan

Have a flexible travel schedule? Discover the best time to fly to San Juan from San Jose with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from San Jose to San Juan

What is the cheapest month to book a flight from San Jose, California to San Juan?

Currently, September is the cheapest month in which you can book a flight from San Jose, California to San Juan (average of $128). Flying from San Jose, California to San Juan in June is currently the most expensive (average of $483). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

How much does it cost to fly round-trip from San Jose, California to San Juan?

Reviews of airlines servicing San Juan

Get insights into the airlines that provide service to San Juan. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to San Juan. Reviews last updated June 13, 2026.
Get a feel of what it's like to fly with Alaska Airlines,Southwest, andDelta from San Jose to San Juan by reading reviews from past customers. Users have also rated airlines in terms of entertainment options, comfort, food, crew/service, and boarding process.

Comfort

7.8

Food

7.0

Entertainment

7.0

Crew

8.5

Overall

7.9

Boarding

8.1

Reviews

1 / 20
10.0
Excellent

Franzi,Mar 2026

SFO - PDX

I love flying with Alaska. I think they sre the best airline.

Comfort

7.8

Food

7.0

Entertainment

7.0

Crew

8.5

Overall

7.9

Boarding

8.1

Reviews

1 / 20
10.0
Excellent

Franzi,Mar 2026

SFO - PDX

I love flying with Alaska. I think they sre the best airline.

Comfort

7.8

Food

7.0

Entertainment

7.0

Crew

8.5

Overall

7.9

Boarding

8.1

Reviews

1 / 20
10.0
Excellent

Franzi,Mar 2026

SFO - PDX

I love flying with Alaska. I think they sre the best airline.

Comfort

7.8

Food

7.0

Entertainment

7.0

Crew

8.5

Overall

7.9

Boarding

8.1

Reviews

1 / 20
10.0
Excellent

Franzi,Mar 2026

SFO - PDX

I love flying with Alaska. I think they sre the best airline.

Comfort

7.8

Food

7.0

Entertainment

7.0

Crew

8.5

Overall

7.9

Boarding

8.1

Reviews

1 / 20
10.0
Excellent

Franzi,Mar 2026

SFO - PDX

I love flying with Alaska. I think they sre the best airline.

Comfort

7.8

Food

7.0

Entertainment

7.0

Crew

8.5

Overall

7.9

Boarding

8.1

Reviews

1 / 20
10.0
Excellent

Franzi,Mar 2026

SFO - PDX

I love flying with Alaska. I think they sre the best airline.

Related info for your journey

Find useful and relevant information for your journey from San Jose to San Juan. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.
  • What airport do you fly from for flights from San Jose to San Juan?

    Most people fly from San Jose (SJC) if they book a flight from San Jose to San Juan. On average, San Jose has 0 outbound flights to San Juan per day from 6 airlines. San Jose is conveniently located just 2.9 mi from San Jose’s city center.

  • How long is the flight from San Jose, California to San Juan?

    For as low as $426, Southwest can have you in San Juan from San Jose, California in 10h 50m. There are 3597 mi between San Jose, California and San Juan. When browsing for deals, the options you’ll see will be for both nonstop flights and flights with stops.

  • What are the cheapest airlines flying from San Jose, California to San Juan round-trip?

    Currently priced at $132, Delta will fly you from San Jose, California to San Juan and back. In addition to Delta, many other airlines offer competitively priced options for your trip. Search Cheapflights for deals from United Airlines and JetBlue - these airlines can fly you to your destination from $298 and $369, respectively. Delta is 75% cheaper than the average price of flights available within the next 90 days to this destination.

  • Can I find deals for flights from San Jose to San Juan that include hotel bookings?

    Yes. In addition to deals on San Jose to San Juan flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from San Jose to San Juan?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from San Jose to San Juan.

  • Can I find deals for business class flights from San Jose to San Juan?

    Yes. Cheapflights offers flight deals from San Jose to San Juan by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from San Jose, California to San Juan?

    Currently, September is the cheapest month in which you can book a flight from San Jose, California to San Juan (average of $128). Flying from San Jose, California to San Juan in June is currently the most expensive (average of $483). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

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Top 6 airlines flying from San Jose to San Juan

Discover the top 6 airlines that operate flights from San Jose to San Juan. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated June 13, 2026.
AirlineCheapestAverageFlexibilityOn-time
DeltaCheapest$132Average$389FlexibilityNo cancel feeOn-timeN/A
United AirlinesCheapest$298Average$541FlexibilityNo cancel feeOn-time69%
JetBlueCheapest$369Average$549FlexibilityNo cancel feeOn-time62%
SouthwestCheapest$376Average$575FlexibilityNo cancel feeOn-time63%
American AirlinesCheapest$394Average$680FlexibilityNo cancel feeOn-time71%
Alaska AirlinesCheapest$685Average$756FlexibilityNo cancel feeOn-time75%

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