San Juan

$98+ Cheap flights from San Francisco (SFO) to San Juan

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 5/9. Fares are subject to change and may not be available on all flights or dates of travel.
SFO — SJU
May 17 — May 241
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Cheap flight deals from San Francisco to San Juan

Cheapest flights from San Francisco to San Juan
Explore the most affordable flight options available from San Francisco to San Juan. Find the lowest fares from popular airlines and budget airlines, with prices last updated on April 17, 2026.

This Kiwi.com deal was found by Cheapflights users on 4/12. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 5/811:59 pm
SFO
-
SJU
1 stop10h 33m
Multiple Airlines
Wed 5/136:41 pm
SJU
-
SFO
2 stops32h 42m
Multiple Airlines
Deal found 4/12$372
This Kiwi.com deal was found by Cheapflights users on 4/12. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 5/3012:52 pm
SFO
-
SJU
2 stops32h 49m
Frontier
Wed 6/106:25 am
SJU
-
SFO
1 stop19h 37m
Frontier
Deal found 4/12$375
This Kiwi.com deal was found by Cheapflights users on 4/15. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 5/1711:59 pm
SFO
-
SJU
1 stop10h 33m
Multiple Airlines
Thu 5/282:09 am
SJU
-
SFO
2 stops25h 14m
Multiple Airlines
Deal found 4/15$384
This Kiwi.com deal was found by Cheapflights users on 4/14. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 5/2312:52 pm
SFO
-
SJU
2 stops49h 22m
Multiple Airlines
Fri 5/292:37 pm
SJU
-
SFO
1 stop11h 27m
Multiple Airlines
Deal found 4/14$386
This Kiwi.com deal was found by Cheapflights users on 4/15. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 5/611:59 pm
SFO
-
SJU
2 stops38h 17m
Multiple Airlines
Thu 5/142:37 pm
SJU
-
SFO
1 stop11h 27m
Multiple Airlines
Deal found 4/15$388
This Priceline deal was found by Cheapflights users on 4/14. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Priceline is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 7/148:51 pm
SFO
-
SJU
1 stop32h 18m
Frontier
Mon 7/206:16 pm
SJU
-
SFO
1 stop19h 13m
Frontier
Deal found 4/14$389
This deal was found by Cheapflights users on 4/14. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 6/98:51 pm
SFO
-
SJU
1 stop13h 25m
Frontier
Wed 6/243:06 am
SJU
-
SFO
1 stop10h 28m
Frontier
Deal found 4/14$390
This Kiwi.com deal was found by Cheapflights users on 4/13. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 5/106:00 am
SFO
-
SJU
2 stops38h 57m
Multiple Airlines
Sat 5/162:37 pm
SJU
-
SFO
1 stop11h 27m
Multiple Airlines
Deal found 4/13$391
This Orbitz deal was found by Cheapflights users on 4/17. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Orbitz is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 6/238:51 pm
SFO
-
SJU
1 stop17h 08m
Frontier
Wed 7/16:05 pm
SJU
-
SFO
1 stop19h 29m
Frontier
Deal found 4/17$393
This Kiwi.com deal was found by Cheapflights users on 4/14. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 5/1110:15 pm
SFO
-
SJU
2 stops16h 11m
Multiple Airlines
Thu 5/142:37 pm
SJU
-
SFO
1 stop11h 27m
Multiple Airlines
Deal found 4/14$394
This Priceline deal was found by Cheapflights users on 4/16. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Priceline is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 5/210:38 pm
SFO
-
SJU
1 stop12h 30m
Multiple Airlines
Wed 5/67:40 am
SJU
-
SFO
1 stop19h 11m
Multiple Airlines
Deal found 4/16$398
This Kiwi.com deal was found by Cheapflights users on 4/16. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 5/911:59 pm
SFO
-
SJU
1 stop10h 33m
Multiple Airlines
Wed 5/136:41 pm
SJU
-
SFO
2 stops31h 23m
Multiple Airlines
Deal found 4/16$399

Find flight deals from San Francisco to San Juan

Discover tips and strategies to find the most affordable flight options for your journey from San Francisco (SFO) to San Juan (PR1). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated April 17, 2026.

Round-trip from

$372
(Kiwi.com)

One-way from

$98
(Frontier)

Popular in

December

Cheapest in

May

Average price

$543
From San Francisco to San Juan
One-way flight from San Francisco to San Juan
Highest demand for flights based on searches. 5% potential increase in price ($26 potential increase over avg. RT price).
Cheapest flight prices on average. 1% potential price decrease ($7 potential savings vs. average RT price).
Average for round-trip flights in April 2026

Cheapflights Fare Finder

 
Customize your flight search to find flights from San Francisco to San Juan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated April 17, 2026.
Use the filters below to find and compare flights from San Francisco to San Juan that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

Cheapest round-trip

San FranciscoSan Juan

SFO - SJU

SFOSJU

San Francisco

Tue 5/26

7:00 am-11:35 pm

1 stop13h 35m

San Juan Luis Munoz Marin Intl

Tue 6/2

2:35 pm-12:17 am

2 stops12h 42m

$482

San FranciscoSan Juan

SFO - SJU

SFOSJU

San Francisco

Tue 6/2

6:15 am-11:35 pm

2 stops14h 20m

San Juan Luis Munoz Marin Intl

Mon 6/8

5:56 pm-12:45 am

1 stop9h 49m

$516

San FranciscoSan Juan

SFO - SJU

SFOSJU

San Francisco

Wed 4/22

9:50 am-11:12 pm

2 stops10h 22m

San Juan Luis Munoz Marin Intl

Sat 4/25

6:15 am-8:51 pm

2 stops17h 36m

$516

San FranciscoSan Juan

SFO - SJU

SFOSJU

San Francisco

Fri 4/24

11:59 pm-4:23 pm

2 stops13h 24m

San Juan Luis Munoz Marin Intl

Wed 4/29

2:03 pm-11:59 pm

2 stops12h 56m

$516

San FranciscoSan Juan

SFO - SJU

SFOSJU

San Francisco

Fri 5/8

7:15 pm-8:55 am

2 stops10h 40m

San Juan Luis Munoz Marin Intl

Tue 5/12

5:05 am-7:55 pm

2 stops17h 50m

$540

San FranciscoSan Juan

SFO - SJU

SFOSJU

San Francisco

Tue 7/14

8:25 am-12:15 am

2 stops12h 50m

San Juan Luis Munoz Marin Intl

Mon 7/20

5:00 am-1:40 pm

2 stops11h 40m

$555
Quickest round-trip

San FranciscoSan Juan

SFO - SJU

SFOSJU

San Francisco

Fri 4/24

5:00 am-5:38 pm

1 stop9h 38m

San Juan Luis Munoz Marin Intl

Mon 4/27

4:55 pm-1:17 am

1 stop11h 22m

$606

San FranciscoSan Juan

SFO - SJU

SFOSJU

San Francisco

Wed 6/3

5:25 am-9:05 pm

2 stops12h 40m

San Juan Luis Munoz Marin Intl

Thu 6/11

9:50 am-6:15 pm

2 stops11h 25m

$636

San FranciscoSan Juan

SFO - SJU

SFOSJU

San Francisco

Fri 5/22

7:15 pm-8:55 am

2 stops10h 40m

San Juan Luis Munoz Marin Intl

Tue 5/26

5:05 am-7:55 pm

2 stops17h 50m

$663

San FranciscoSan Juan

SFO - SJU

SFOSJU

San Francisco

Fri 6/5

10:10 am-1:20 am

2 stops12h 10m

San Juan Luis Munoz Marin Intl

Wed 6/10

9:50 am-6:50 pm

2 stops12h 00m

$664

Flights are sorted by cheapest round-trip flights first.

Deals found on 4/16

Showing 1-10 of 20 resultsSorted by cheapest first
1
2

Best time to book a flight from San Francisco to San Juan

Have a flexible travel schedule? Discover the best time to fly to San Juan from San Francisco with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from San Francisco to San Juan

How far ahead should I book a flight from San Francisco to San Juan?

Use this chart to determine the optimal time to book a round-trip flight from San Francisco to San Juan. Price data was last updated on April 10, 2026.

The best time to book flights from San Francisco to San Juan is 73 days before your desired departure date. The cost of your flight will likely increase significantly if you book two weeks in advance of your flight.

What is the cheapest month to book a flight from San Francisco to San Juan?

Currently, April is the cheapest month in which you can book a flight from San Francisco to San Juan (average of $122). Flying from San Francisco to San Juan in February is currently the most expensive (average of $263). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

How much does it cost to fly round-trip from San Francisco to San Juan?

Reviews of airlines servicing San Juan

Get insights into the airlines that provide service to San Juan. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to San Juan. Reviews last updated April 17, 2026.
Peruse reviews from past customers who have flown with Delta,United Airlines, andJetBlue from San Francisco to San Juan to help guide your decision. You can also see how each airline stacks up in terms of entertainment options, comfort, food, crew/service, and boarding process.

Comfort

7.9

Food

7.2

Boarding

8.1

Overall

7.9

Entertainment

7.8

Crew

8.5

Reviews

1 / 20
10.0
Excellent

Aaron,Oct 2024

LAX - LHR

This was a flight operated by Virgin Atlantic in their Upper Class cabin. Overall, an outstanding experience.

Comfort

7.9

Food

7.2

Boarding

8.1

Overall

7.9

Entertainment

7.8

Crew

8.5

Reviews

1 / 20
10.0
Excellent

Aaron,Oct 2024

LAX - LHR

This was a flight operated by Virgin Atlantic in their Upper Class cabin. Overall, an outstanding experience.

Comfort

7.9

Food

7.2

Boarding

8.1

Overall

7.9

Entertainment

7.8

Crew

8.5

Reviews

1 / 20
10.0
Excellent

Aaron,Oct 2024

LAX - LHR

This was a flight operated by Virgin Atlantic in their Upper Class cabin. Overall, an outstanding experience.

Comfort

7.9

Food

7.2

Boarding

8.1

Overall

7.9

Entertainment

7.8

Crew

8.5

Reviews

1 / 20
10.0
Excellent

Aaron,Oct 2024

LAX - LHR

This was a flight operated by Virgin Atlantic in their Upper Class cabin. Overall, an outstanding experience.

Comfort

7.9

Food

7.2

Boarding

8.1

Overall

7.9

Entertainment

7.8

Crew

8.5

Reviews

1 / 20
10.0
Excellent

Aaron,Oct 2024

LAX - LHR

This was a flight operated by Virgin Atlantic in their Upper Class cabin. Overall, an outstanding experience.

Comfort

7.9

Food

7.2

Boarding

8.1

Overall

7.9

Entertainment

7.8

Crew

8.5

Reviews

1 / 20
10.0
Excellent

Aaron,Oct 2024

LAX - LHR

This was a flight operated by Virgin Atlantic in their Upper Class cabin. Overall, an outstanding experience.

Related info for your journey

Find useful and relevant information for your journey from San Francisco to San Juan. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.
  • What airport do you fly from for flights from San Francisco to San Juan?

    If you book a flight to San Juan from San Francisco, you will be flying from San Francisco, which is the city’s only airport. San Francisco (SFO) is located 11.0 mi from the center of San Francisco. There are 0 flights from San Francisco to San Juan per day from 8 different airlines.

  • How long is the flight from San Francisco to San Juan?

    A quick flight from San Francisco to San Juan can take about 10h 40m. Delta provides one of the quickest options available for as low as $540. San Francisco and San Juan are separated by a distance of 3623 mi. Both multi-stop and nonstop flights can be found to your destination and back.

  • What are the cheapest airlines flying from San Francisco to San Juan round-trip?

    Cheapflights users have booked flights from San Francisco to San Juan round-trip from $135. Other airlines that can offer you cheap pricing are Delta, from $172, and Sun Country Air, from $222. These flights start at 72% lower than the current average price 3 months from now.

  • What are the cheapest airlines to fly from San Francisco to San Juan one-way?

    To fly one-way, consider booking your trip with Frontier, which is currently one of the cheapest options available, starting at $134. JetBlue flights start at $178 while deals on American Airlines start at $180 one-way.

  • Where are the most common layover locations when flying from San Francisco to San Juan?

  • What are some popular things to do or see while on a layover in Fort Lauderdale?

    Las Olas Beach, Fort Lauderdale Beach Park, and Las Olas Boulevard are the most popular attractions in Fort Lauderdale if you're in need of something to do during your layover. Las Olas Beach, Fort Lauderdale Beach Park, and Las Olas Boulevard can be accessed by traveling approximately 4.1 mi, 4.2 mi, and 3.6 mi, respectively from Fort Lauderdale. Travelers can book a car rental at Fort Lauderdale for about $28 per day to make their sightseeing more efficient.

  • What are some popular points of interest to see during a layover in Charlotte?

    The majority of Charlotte visitors spend their time at North Carolina Blumenthal Performing Arts Center, NASCAR Hall of Fame, and Mint Museum Uptown. Those on a layover in Charlotte interested in visiting North Carolina Blumenthal Performing Arts Center, NASCAR Hall of Fame, or Mint Museum Uptown can do so by traveling 5.8 mi, 5.7 mi, and 5.4 mi, respectively from Charlotte Douglas. Those looking to explore during their layover in Charlotte can rent a car from Charlotte Douglas for about $50 per day.

  • What are points of interest worth seeing during a layover in Dallas?

    If you're on a layover in Dallas and looking for things to do, consider visiting American Airlines Center, Dallas World Aquarium, or Reunion Tower. American Airlines Center, Dallas World Aquarium, and Reunion Tower are located about 15.0 mi, 15.5 mi, and 15.6 mi, respectively from Dallas/Fort Worth. Those landing in Dallas looking to spend some time exploring during their layover can rent a car for about $56 per day.

  • Where are the least popular layover locations for San Francisco to San Juan flights?

  • Can I find deals for flights from San Francisco to San Juan that include hotel bookings?

    Yes. In addition to deals on San Francisco to San Juan flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from San Francisco to San Juan?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from San Francisco to San Juan.

  • Can I find deals for business class flights from San Francisco to San Juan?

    Yes. Cheapflights offers flight deals from San Francisco to San Juan by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from San Francisco to San Juan?

    Currently, April is the cheapest month in which you can book a flight from San Francisco to San Juan (average of $122). Flying from San Francisco to San Juan in February is currently the most expensive (average of $263). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

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Top 8 airlines flying from San Francisco to San Juan

Discover the top 8 airlines that operate flights from San Francisco to San Juan. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated April 17, 2026.
AirlineCheapestAverageFlexibilityOn-time
FrontierCheapest$135Average$361FlexibilityNo cancel feeOn-time62%
DeltaCheapest$172Average$412FlexibilityNo cancel feeOn-timeN/A
Sun Country AirCheapest$222Average$834FlexibilityNo cancel feeOn-time83%
JetBlueCheapest$273Average$404FlexibilityNo cancel feeOn-time62%
Alaska AirlinesCheapest$329Average$428FlexibilityNo cancel feeOn-time75%
United AirlinesCheapest$358Average$530FlexibilityNo cancel feeOn-time69%
American AirlinesCheapest$359Average$554FlexibilityNo cancel feeOn-time71%
SouthwestCheapest$412Average$593FlexibilityNo cancel feeOn-time63%

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