San Juan

$186+ Cheap flights from San Francisco (SFO) to San Juan

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 9/1. Fares are subject to change and may not be available on all flights or dates of travel.
SFO — SJU
Jul 5 — Jul 121
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Cheap flight deals from San Francisco to San Juan

Cheapest flights from San Francisco to San Juan
Explore the most affordable flight options available from San Francisco to San Juan. Find the lowest fares from popular airlines and budget airlines, with prices last updated on June 5, 2026.

This Priceline deal was found by Cheapflights users on 6/4. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Priceline is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 8/2510:15 pm
SFO
-
SJU
1 stop13h 00m
Multiple Airlines
Tue 9/221:00 pm
SJU
-
SFO
1 stop13h 31m
Multiple Airlines
Deal found 6/4$411
This Expedia deal was found by Cheapflights users on 6/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Expedia is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 8/1511:00 pm
SFO
-
SJU
1 stop12h 16m
Multiple Airlines
Wed 8/194:58 pm
SJU
-
SFO
1 stop9h 52m
Multiple Airlines
Deal found 6/1$431
This CheapOair deal was found by Cheapflights users on 6/3. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure CheapOair is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 8/3010:15 pm
SFO
-
SJU
1 stop13h 00m
Multiple Airlines
Wed 9/162:30 pm
SJU
-
SFO
1 stop11h 47m
Multiple Airlines
Deal found 6/3$436
This Super.com deal was found by Cheapflights users on 6/2. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Super.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 8/1910:57 am
SFO
-
SJU
1 stop9h 21m
JetBlue
Wed 8/264:58 pm
SJU
-
SFO
1 stop9h 52m
JetBlue
Deal found 6/2$440
This CheapOair deal was found by Cheapflights users on 6/4. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure CheapOair is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 8/1711:05 pm
SFO
-
SJU
1 stop12h 10m
Multiple Airlines
Sat 8/224:58 pm
SJU
-
SFO
1 stop9h 52m
Multiple Airlines
Deal found 6/4$441
This Cheapflightsfares deal was found by Cheapflights users on 6/4. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Cheapflightsfares is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 8/2710:57 am
SFO
-
SJU
1 stop9h 21m
JetBlue
Tue 9/14:58 pm
SJU
-
SFO
1 stop9h 52m
JetBlue
Deal found 6/4$442
This Southwest deal was found by Cheapflights users on 6/3. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 8/107:25 pm
SFO
-
SJU
2 stops12h 35m
Southwest
Thu 8/135:00 am
SJU
-
SFO
2 stops12h 10m
Southwest
Deal found 6/3$446
This JetBlue deal was found by Cheapflights users on 6/2. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure JetBlue is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 8/2210:57 am
SFO
-
SJU
1 stop9h 21m
JetBlue
Thu 8/274:58 pm
SJU
-
SFO
1 stop9h 52m
JetBlue
Deal found 6/2$447
This Priceline deal was found by Cheapflights users on 6/1. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Priceline is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 8/711:00 pm
SFO
-
SJU
1 stop12h 16m
Multiple Airlines
Fri 8/144:58 pm
SJU
-
SFO
1 stop9h 52m
Multiple Airlines
Deal found 6/1$451
This CheapOair deal was found by Cheapflights users on 6/3. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure CheapOair is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 8/910:40 pm
SFO
-
SJU
1 stop13h 41m
JetBlue
Sat 8/154:58 pm
SJU
-
SFO
1 stop9h 52m
JetBlue
Deal found 6/3$453

Find flight deals from San Francisco to San Juan

Discover tips and strategies to find the most affordable flight options for your journey from San Francisco (SFO) to San Juan (PR1). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated June 5, 2026.

Round-trip from

$411
(Priceline)

One-way from

$186
(Super.com)

Popular in

December

Cheapest in

September

Average price

$558
From San Francisco to San Juan
One-way flight from San Francisco to San Juan
Highest demand for flights based on searches. 3% potential increase in price ($20 potential increase over avg. RT price).
Cheapest flight prices on average. 1% potential price decrease ($8 potential savings vs. average RT price).
Average for round-trip flights in June 2026

Cheapflights Fare Finder

 
Customize your flight search to find flights from San Francisco to San Juan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated June 5, 2026.
Use the filters below to find and compare flights from San Francisco to San Juan that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

Cheapest round-trip

San FranciscoSan Juan

SFO - SJU

SFOSJU

San Francisco

Wed 8/19

10:57 am-11:18 pm

1 stop9h 21m

San Juan Luis Munoz Marin Intl

Tue 8/25

3:01 pm-11:50 pm

1 stop11h 49m

$457
Quickest round-trip

San FranciscoSan Juan

SFO - SJU

SFOSJU

San Francisco

Wed 8/19

10:57 am-11:18 pm

1 stop9h 21m

San Juan Luis Munoz Marin Intl

Sat 8/29

4:58 pm-11:50 pm

1 stop9h 52m

$457

San FranciscoSan Juan

SFO - SJU

SFOSJU

San Francisco

Tue 7/14

8:25 am-12:20 am

2 stops12h 55m

San Juan Luis Munoz Marin Intl

Mon 7/20

5:00 am-1:40 pm

2 stops11h 40m

$624

San FranciscoSan Juan

SFO - SJU

SFOSJU

San Francisco

Wed 7/22

8:25 am-12:20 am

2 stops12h 55m

San Juan Luis Munoz Marin Intl

Mon 7/27

5:30 am-5:30 pm

1 stop15h 00m

$624

San FranciscoSan Juan

SFO - SJU

SFOSJU

San Francisco

Wed 6/10

5:00 am-5:38 pm

1 stop9h 38m

San Juan Luis Munoz Marin Intl

Sun 6/14

4:55 pm-1:15 am

1 stop11h 20m

$625

San FranciscoSan Juan

SFO - SJU

SFOSJU

San Francisco

Tue 6/9

5:00 am-5:38 pm

1 stop9h 38m

San Juan Luis Munoz Marin Intl

Sun 6/14

4:55 pm-1:15 am

1 stop11h 20m

$625

San FranciscoSan Juan

SFO - SJU

SFOSJU

San Francisco

Sat 7/4

5:00 am-9:00 pm

2 stops13h 00m

San Juan Luis Munoz Marin Intl

Thu 7/23

9:50 am-6:15 pm

2 stops11h 25m

$647

San FranciscoSan Juan

SFO - SJU

SFOSJU

San Francisco

Sat 7/4

11:00 am-11:59 pm

1 stop9h 59m

San Juan Luis Munoz Marin Intl

Fri 7/10

5:00 pm-11:51 pm

1 stop9h 51m

$658

San FranciscoSan Juan

SFO - SJU

SFOSJU

San Francisco

Sat 7/4

5:20 am-9:00 pm

2 stops12h 40m

San Juan Luis Munoz Marin Intl

Sat 7/11

9:10 am-9:15 pm

2 stops15h 05m

$664

San FranciscoSan Juan

SFO - SJU

SFOSJU

San Francisco

Sun 8/30

6:28 pm-1:42 pm

2 stops16h 14m

San Juan Luis Munoz Marin Intl

Mon 9/7

7:30 am-9:59 pm

2 stops17h 29m

$732

Flights are sorted by cheapest round-trip flights first.

Deals found on 6/4

Showing 1-10 of 20 resultsSorted by cheapest first
1
2

Best time to book a flight from San Francisco to San Juan

Have a flexible travel schedule? Discover the best time to fly to San Juan from San Francisco with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from San Francisco to San Juan

What is the cheapest month to book a flight from San Francisco to San Juan?

Currently, May is the cheapest month in which you can book a flight from San Francisco to San Juan (average of $97). Flying from San Francisco to San Juan in February is currently the most expensive (average of $263). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

How much does it cost to fly round-trip from San Francisco to San Juan?

How far ahead should I book a flight from San Francisco to San Juan?

The best time to book flights from San Francisco to San Juan is 72 days before your desired departure date. The cost of your flight will likely increase significantly if you book two weeks in advance of your flight.

Reviews of airlines servicing San Juan

Get insights into the airlines that provide service to San Juan. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to San Juan. Reviews last updated June 5, 2026.
Peruse reviews from past customers who have flown with Delta,United Airlines, andAmerican Airlines from San Francisco to San Juan to help guide your decision. You can also see how each airline stacks up in terms of entertainment options, comfort, food, crew/service, and boarding process.

Boarding

8.1

Food

7.2

Overall

7.9

Entertainment

7.8

Comfort

7.8

Crew

8.5

Reviews

1 / 20
10.0
Excellent

Aaron,Oct 2024

LAX - LHR

This was a flight operated by Virgin Atlantic in their Upper Class cabin. Overall, an outstanding experience.

Boarding

8.1

Food

7.2

Overall

7.9

Entertainment

7.8

Comfort

7.8

Crew

8.5

Reviews

1 / 20
10.0
Excellent

Aaron,Oct 2024

LAX - LHR

This was a flight operated by Virgin Atlantic in their Upper Class cabin. Overall, an outstanding experience.

Boarding

8.1

Food

7.2

Overall

7.9

Entertainment

7.8

Comfort

7.8

Crew

8.5

Reviews

1 / 20
10.0
Excellent

Aaron,Oct 2024

LAX - LHR

This was a flight operated by Virgin Atlantic in their Upper Class cabin. Overall, an outstanding experience.

Boarding

8.1

Food

7.2

Overall

7.9

Entertainment

7.8

Comfort

7.8

Crew

8.5

Reviews

1 / 20
10.0
Excellent

Aaron,Oct 2024

LAX - LHR

This was a flight operated by Virgin Atlantic in their Upper Class cabin. Overall, an outstanding experience.

Boarding

8.1

Food

7.2

Overall

7.9

Entertainment

7.8

Comfort

7.8

Crew

8.5

Reviews

1 / 20
10.0
Excellent

Aaron,Oct 2024

LAX - LHR

This was a flight operated by Virgin Atlantic in their Upper Class cabin. Overall, an outstanding experience.

Boarding

8.1

Food

7.2

Overall

7.9

Entertainment

7.8

Comfort

7.8

Crew

8.5

Reviews

1 / 20
10.0
Excellent

Aaron,Oct 2024

LAX - LHR

This was a flight operated by Virgin Atlantic in their Upper Class cabin. Overall, an outstanding experience.

Related info for your journey

Find useful and relevant information for your journey from San Francisco to San Juan. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.
  • What airport do you fly from for flights from San Francisco to San Juan?

    If you book a flight to San Juan from San Francisco, you will be flying from San Francisco, which is the city’s only airport. San Francisco (SFO) is located 11.0 mi from the center of San Francisco. There are 0 flights from San Francisco to San Juan per day from 8 different airlines.

  • How long is the flight from San Francisco to San Juan?

    A quick flight from San Francisco to San Juan can take about 9h 21m. JetBlue provides one of the quickest options available for as low as $457. San Francisco and San Juan are separated by a distance of 3623 mi. Both multi-stop and nonstop flights can be found to your destination and back.

  • What are the cheapest airlines flying from San Francisco to San Juan round-trip?

    Cheapflights users have booked flights from San Francisco to San Juan round-trip from $134. Other airlines that can offer you cheap pricing are Delta, from $185, and Sun Country Air, from $222. These flights start at 73% lower than the current average price 3 months from now.

  • What are the cheapest airlines to fly from San Francisco to San Juan one-way?

    To fly one-way, consider booking your trip with Frontier, which is currently one of the cheapest options available, starting at $134. JetBlue flights start at $178 while deals on American Airlines start at $180 one-way.

  • Where are the most common layover locations when flying from San Francisco to San Juan?

  • What are some popular things to do or see while on a layover in Fort Lauderdale?

    Las Olas Beach, Las Olas Boulevard, and Fort Lauderdale Beach Park are the most popular attractions in Fort Lauderdale if you're in need of something to do during your layover. Las Olas Beach, Las Olas Boulevard, and Fort Lauderdale Beach Park can be accessed by traveling approximately 4.1 mi, 3.6 mi, and 4.2 mi, respectively from Fort Lauderdale. Travelers can book a car rental at Fort Lauderdale for about $25 per day to make their sightseeing more efficient.

  • What are some popular points of interest to see during a layover in Charlotte?

    The majority of Charlotte visitors spend their time at North Carolina Blumenthal Performing Arts Center, Mint Museum Uptown, and NASCAR Hall of Fame. Those on a layover in Charlotte interested in visiting North Carolina Blumenthal Performing Arts Center, Mint Museum Uptown, or NASCAR Hall of Fame can do so by traveling 5.8 mi, 5.4 mi, and 5.7 mi, respectively from Charlotte Douglas. Those looking to explore during their layover in Charlotte can rent a car from Charlotte Douglas for about $49 per day.

  • What are points of interest worth seeing during a layover in Dallas?

    If you're on a layover in Dallas and looking for things to do, consider visiting American Airlines Center, Dallas World Aquarium, or Reunion Tower. American Airlines Center, Dallas World Aquarium, and Reunion Tower are located about 15.0 mi, 15.5 mi, and 15.6 mi, respectively from Dallas/Fort Worth. Those landing in Dallas looking to spend some time exploring during their layover can rent a car for about $60 per day.

  • Where are the least popular layover locations for San Francisco to San Juan flights?

  • Can I find deals for flights from San Francisco to San Juan that include hotel bookings?

    Yes. In addition to deals on San Francisco to San Juan flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from San Francisco to San Juan?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from San Francisco to San Juan.

  • Can I find deals for business class flights from San Francisco to San Juan?

    Yes. Cheapflights offers flight deals from San Francisco to San Juan by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from San Francisco to San Juan?

    Currently, May is the cheapest month in which you can book a flight from San Francisco to San Juan (average of $97). Flying from San Francisco to San Juan in February is currently the most expensive (average of $263). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

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Top 8 airlines flying from San Francisco to San Juan

Discover the top 8 airlines that operate flights from San Francisco to San Juan. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated June 5, 2026.
AirlineCheapestAverageFlexibilityOn-time
FrontierCheapest$134Average$387FlexibilityNo cancel feeOn-time62%
DeltaCheapest$185Average$470FlexibilityNo cancel feeOn-timeN/A
Sun Country AirCheapest$222Average$748FlexibilityNo cancel feeOn-time83%
JetBlueCheapest$277Average$413FlexibilityNo cancel feeOn-time62%
United AirlinesCheapest$344Average$543FlexibilityNo cancel feeOn-time69%
Alaska AirlinesCheapest$351Average$756FlexibilityNo cancel feeOn-time75%
American AirlinesCheapest$364Average$575FlexibilityNo cancel feeOn-time71%
SouthwestCheapest$398Average$593FlexibilityNo cancel feeOn-time63%

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