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$114+ Cheap flights from Missoula (MSO) to San Francisco Bay Area

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 2/3. Fares are subject to change and may not be available on all flights or dates of travel.
MSO — SFO
Nov 12 — Nov 191
Wed 11/12
Wed 11/19
1 adult, Economy
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Cheap flight deals from Missoula to San Francisco Bay Area

Keep the following information in mind while searching for Missoula to San Francisco Bay Area flight deals. Data was last updated October 13, 2025.

Most accurate provider

FlightHub
3 stars

Most trusted provider

FlightHub
3 stars

Round-trip from

$228
(Hawaiian Airlines)

One-way from

$114
(Alaska Airlines)

Popular in

November

Cheapest in

February

Average price

$319
Provider with most accurate pricing for Missoula Johnson-Bell Field-San Francisco flight deals.
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From Missoula Johnson-Bell Field to San Francisco Bay Area
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One-way flight from Missoula Johnson-Bell Field to San Francisco Bay Area
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Highest demand for flights based on searches. 10% potential increase in price ($35 potential increase over avg. RT price).
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Cheapest flight prices on average. 1% potential price decrease ($6 potential savings vs. average RT price).
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Average for round-trip flights in October 2025
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Find flight deals from Missoula to San Francisco Bay Area

Cheapest flights from Missoula to San Francisco Bay Area
Explore the most affordable flight options available from Missoula to San Francisco Bay Area. Find the lowest fares from popular airlines and budget airlines, with prices last updated on October 13, 2025.

This Kiwi.com deal was found by Cheapflights users on 10/13. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 11/136:32 amMSO - SFO
1 stop5h 12mHawaiian Airlines
Mon 11/174:39 pmSFO - MSO
1 stop6h 04mHawaiian Airlines
Deal found 10/13$210
This Alaska Airlines deal was found by Cheapflights users on 10/12. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Alaska Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 12/102:14 pmMSO - SFO
1 stop7h 01mAlaska Airlines
Sat 12/1312:22 pmSFO - MSO
1 stop11h 04mAlaska Airlines
Deal found 10/12$228
This Delta deal was found by Cheapflights users on 10/12. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 11/65:25 amMSO - SFO
2 stops10h 08mDelta
Mon 11/107:11 pmSFO - MSO
1 stop4h 08mDelta
Deal found 10/12$234
This Alaska Airlines deal was found by Cheapflights users on 10/12. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Alaska Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 11/64:12 pmMSO - SFO
1 stop7h 29mAlaska Airlines
Mon 11/109:00 amSFO - MSO
1 stop5h 24mAlaska Airlines
Deal found 10/12$238
This Alaska Airlines deal was found by Cheapflights users on 10/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Alaska Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 12/162:14 pmMSO - SJC
1 stop6h 46mAlaska Airlines
Wed 12/316:30 pmSJC - MSO
1 stop4h 39mAlaska Airlines
Deal found 10/11$238
This Delta deal was found by Cheapflights users on 10/12. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 10/276:20 pmMSO - SFO
1 stop6h 24mDelta
Wed 11/512:03 pmSFO - MSO
1 stop8h 37mDelta
Deal found 10/12$239
This Alaska Airlines deal was found by Cheapflights users on 10/13. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Alaska Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 11/64:12 pmMSO - SFO
1 stop7h 29mAlaska Airlines
Sun 11/98:43 pmSFO - MSO
1 stop14h 36mAlaska Airlines
Deal found 10/13$248
This Alaska Airlines deal was found by Cheapflights users on 10/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Alaska Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 12/142:14 pmMSO - SJC
1 stop6h 46mAlaska Airlines
Tue 12/307:05 amSJC - MSO
1 stop4h 49mAlaska Airlines
Deal found 10/11$255
This Alaska Airlines deal was found by Cheapflights users on 10/12. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Alaska Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 12/115:30 amMSO - SFO
2 stops13h 33mAlaska Airlines
Sat 12/136:20 pmSFO - MSO
1 stop5h 06mAlaska Airlines
Deal found 10/12$261
This Alaska Airlines deal was found by Cheapflights users on 10/12. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Alaska Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 12/102:14 pmMSO - OAK
1 stop10h 45mAlaska Airlines
Sat 12/1311:21 amOAK - MSO
1 stop12h 05mAlaska Airlines
Deal found 10/12$262
This Kiwi.com deal was found by Cheapflights users on 10/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 10/278:44 pmMSO - SFO
2 stops26h 43mMultiple Airlines
Fri 10/315:45 amSFO - MSO
1 stop14h 51mMultiple Airlines
Deal found 10/11$273
This Alaska Airlines deal was found by Cheapflights users on 10/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Alaska Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 12/154:22 pmMSO - SJC
1 stop4h 38mAlaska Airlines
Thu 1/16:15 amSJC - MSO
1 stop4h 34mAlaska Airlines
Deal found 10/11$273

Cheapflights Fare Finder

 
Customize your flight search to find flights from Missoula to San Francisco Bay Area that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated October 13, 2025.
Use the filters below to find and compare flights from Missoula to San Francisco Bay Area that are best for you.

Fly from

Missoula

Fly to

San Francisco Bay Area

Route

Depart

Return

Price

MissoulaSan Francisco

MSO - SFO

MSOSFO

Missoula Johnson-Bell Field

Thu 11/13

6:32 am-10:44 am

1 stop5h 12m

San Francisco

Mon 11/17

4:39 pm-11:43 pm

1 stop6h 04m

$210

MissoulaSan Francisco

MSO - SFO

MSOSFO

Missoula Johnson-Bell Field

Thu 12/11

5:30 am-8:59 am

1 stop4h 29m

San Francisco

Sat 12/13

7:35 am-3:32 pm

1 stop6h 57m

$228

MissoulaSan Francisco

MSO - SFO

MSOSFO

Missoula Johnson-Bell Field

Tue 3/10

5:45 am-8:49 am

1 stop4h 04m

San Francisco

Wed 3/11

8:00 am-1:09 pm

1 stop4h 09m

$228

MissoulaSan Francisco

MSO - SFO

MSOSFO

Missoula Johnson-Bell Field

Wed 12/10

2:14 pm-8:15 pm

1 stop7h 01m

San Francisco

Sat 12/13

12:22 pm-12:26 am

1 stop11h 04m

$228

MissoulaSan Francisco

MSO - SFO

MSOSFO

Missoula Johnson-Bell Field

Thu 11/6

5:25 am-2:33 pm

2 stops10h 08m

San Francisco

Thu 11/13

9:51 am-5:34 pm

1 stop6h 43m

$234

MissoulaSan Francisco

MSO - SFO

MSOSFO

Missoula Johnson-Bell Field

Thu 11/6

5:25 am-2:33 pm

2 stops10h 08m

San Francisco

Mon 11/10

7:11 pm-12:19 am

1 stop4h 08m

$234

MissoulaSan Francisco

MSO - SFO

MSOSFO

Missoula Johnson-Bell Field

Thu 11/13

6:16 pm-11:55 pm

1 stop6h 39m

San Francisco

Mon 11/17

1:58 pm-12:19 am

2 stops9h 21m

$234

MissoulaSan Francisco

MSO - SFO

MSOSFO

Missoula Johnson-Bell Field

Wed 12/10

5:01 am-2:36 pm

2 stops10h 35m

San Francisco

Sat 12/13

5:05 pm-11:29 pm

1 stop5h 24m

$234

MissoulaSan Jose

MSO - SJC

MSOSJC

Missoula Johnson-Bell Field

Tue 12/16

2:14 pm-8:00 pm

1 stop6h 46m

San Jose

Wed 12/31

6:30 pm-12:09 am

1 stop4h 39m

$238

MissoulaSan Jose

MSO - SJC

MSOSJC

Missoula Johnson-Bell Field

Sat 12/6

1:12 pm-4:51 pm

1 stop4h 39m

San Jose

Wed 12/10

6:18 am-12:32 pm

1 stop5h 14m

$238

Flights are sorted by cheapest round-trip flights first.

Deals found on 10/11

Showing 1-10 of 56 results
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Best time to book a flight from Missoula to San Francisco Bay Area

Have a flexible travel schedule? Discover the best time to fly to San Francisco Bay Area from Missoula with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Missoula to San Francisco Bay Area

What is the cheapest month to book a flight from Missoula to San Francisco Bay Area?

Currently, July is the cheapest month in which you can book a flight from Missoula to San Francisco Bay Area (average of $41). Flying from Missoula to San Francisco Bay Area in September is currently the most expensive (average of $241). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from MSO to XIH?

Find hourly flight availability from Missoula to San Francisco Bay Area. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated October 13, 2025.

A simple way to save on the total cost of your ticket is to fly from Missoula to San Francisco Bay Area in the afternoon. If you’re flexible enough to do this you can expect to save up to 51% on your trip compared to booking a flight at noon.

Reviews of airlines servicing San Francisco Bay Area

Get insights into the airlines that provide service to San Francisco Bay Area. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to San Francisco Bay Area. Reviews last updated October 13, 2025.
Read reviews from past customers who have flown Alaska Airlines, Delta, and Hawaiian Airlines from Missoula to San Francisco Bay Area. Users have also rated airlines in terms of entertainment options, comfort, food, crew/service, and boarding process.
Alaska Airlines
8.0
Very good
11,066 reviews

Entertainment

7.1

Crew

8.5

Food

7.1

Boarding

8.1

Overall

8.0

Comfort

7.8

Reviews

1 / 20
6.0
Good

Hannah,Aug 2025

SFO - SAN

Ticket said TSA pre check, but then the TSA agent said that Alaska Airlines has not actually entered the pre check information for the ticket, so I had to use regular security. During boarding, I have a disability and need to board early. The Alaska Airlines employee announced disability boarding, but then immediately announced 2 other groups to board, so I still had to fight the crowds. On the plane, the stewardess was brusk and rude. Seats were very uncomfortable, especially on lower back.
Alaska Airlines
8.0
Very good
11,066 reviews
Alaska Airlines
8.0
Very good
11,066 reviews

Entertainment

7.1

Crew

8.5

Food

7.1

Boarding

8.1

Overall

8.0

Comfort

7.8

Reviews

1 / 20
6.0
Good

Hannah,Aug 2025

SFO - SAN

Ticket said TSA pre check, but then the TSA agent said that Alaska Airlines has not actually entered the pre check information for the ticket, so I had to use regular security. During boarding, I have a disability and need to board early. The Alaska Airlines employee announced disability boarding, but then immediately announced 2 other groups to board, so I still had to fight the crowds. On the plane, the stewardess was brusk and rude. Seats were very uncomfortable, especially on lower back.
Delta
8.0
Very good
7,973 reviews
Alaska Airlines
8.0
Very good
11,066 reviews

Entertainment

7.1

Crew

8.5

Food

7.1

Boarding

8.1

Overall

8.0

Comfort

7.8

Reviews

1 / 20
6.0
Good

Hannah,Aug 2025

SFO - SAN

Ticket said TSA pre check, but then the TSA agent said that Alaska Airlines has not actually entered the pre check information for the ticket, so I had to use regular security. During boarding, I have a disability and need to board early. The Alaska Airlines employee announced disability boarding, but then immediately announced 2 other groups to board, so I still had to fight the crowds. On the plane, the stewardess was brusk and rude. Seats were very uncomfortable, especially on lower back.
Hawaiian Airlines
7.8
Good
2,778 reviews
Alaska Airlines
8.0
Very good
11,066 reviews

Entertainment

7.1

Crew

8.5

Food

7.1

Boarding

8.1

Overall

8.0

Comfort

7.8

Reviews

1 / 20
6.0
Good

Hannah,Aug 2025

SFO - SAN

Ticket said TSA pre check, but then the TSA agent said that Alaska Airlines has not actually entered the pre check information for the ticket, so I had to use regular security. During boarding, I have a disability and need to board early. The Alaska Airlines employee announced disability boarding, but then immediately announced 2 other groups to board, so I still had to fight the crowds. On the plane, the stewardess was brusk and rude. Seats were very uncomfortable, especially on lower back.
United Airlines
7.4
Good
8,973 reviews
Alaska Airlines
8.0
Very good
11,066 reviews

Entertainment

7.1

Crew

8.5

Food

7.1

Boarding

8.1

Overall

8.0

Comfort

7.8

Reviews

1 / 20
6.0
Good

Hannah,Aug 2025

SFO - SAN

Ticket said TSA pre check, but then the TSA agent said that Alaska Airlines has not actually entered the pre check information for the ticket, so I had to use regular security. During boarding, I have a disability and need to board early. The Alaska Airlines employee announced disability boarding, but then immediately announced 2 other groups to board, so I still had to fight the crowds. On the plane, the stewardess was brusk and rude. Seats were very uncomfortable, especially on lower back.
Allegiant Air
7.2
Good
694 reviews
Alaska Airlines
8.0
Very good
11,066 reviews

Entertainment

7.1

Crew

8.5

Food

7.1

Boarding

8.1

Overall

8.0

Comfort

7.8

Reviews

1 / 20
6.0
Good

Hannah,Aug 2025

SFO - SAN

Ticket said TSA pre check, but then the TSA agent said that Alaska Airlines has not actually entered the pre check information for the ticket, so I had to use regular security. During boarding, I have a disability and need to board early. The Alaska Airlines employee announced disability boarding, but then immediately announced 2 other groups to board, so I still had to fight the crowds. On the plane, the stewardess was brusk and rude. Seats were very uncomfortable, especially on lower back.

Related info for your journey

Find useful and relevant information for your journey from Missoula to San Francisco Bay Area. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly from for flights from Missoula to San Francisco Bay Area?

    Missoula Johnson-Bell Field (MSO) is the airport you will fly out of if you book a flight from Missoula to San Francisco Bay Area. It is only a 5.5 mi journey to Johnson-Bell Field (MSO) from Missoula’s city center.

  • How popular is this Missoula to San Francisco Bay Area flight route?

    Within the past month, 4 users have taken a look at flights from Missoula Johnson-Bell Field to San Francisco Bay Area.

  • How long is the flight from Missoula to San Francisco Bay Area?

    Hawaiian Airlines and Alaska Airlines can get you from Missoula to San Francisco Bay Area in just under 4h 29m. Your travel time can differ by up to 43m. The distance from Missoula to San Francisco Bay Area is about 768 mi. This flight may include one or multiple stops.

  • What are the most popular routes from Missoula to San Francisco Bay Area?

    Most travelers choose Missoula Johnson-Bell Field - San Francisco, Missoula Johnson-Bell Field - San Jose or Missoula Johnson-Bell Field - Oakland when deciding on the best route from Missoula to San Francisco Bay Area.

  • What are the most reliable airlines from Missoula to San Francisco Bay Area?

    Looking for the most reliable airlines to get you to your destination on time? Our data shows these are most likely to get you from Missoula to San Francisco Bay Area on time: SkyWest Airlines (99%), United Airlines (99%), Air New Zealand (97%).

  • What are the cheapest flights from Missoula to San Francisco Bay Area?

    On average you can expect to pay $802 for a flight from Missoula to San Francisco Bay Area. The cheapest flight overall is $399 while the most popular route, (Missoula Johnson-Bell Field - San Francisco) is currently priced at $228.

  • Can I find deals for flights from Missoula to San Francisco Bay Area that include hotel bookings?

    Yes. In addition to deals on Missoula to San Francisco Bay Area flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Missoula to San Francisco Bay Area?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Missoula to San Francisco Bay Area.

  • Can I find deals for business class flights from Missoula to San Francisco Bay Area?

    Yes. Cheapflights offers flight deals from Missoula to San Francisco Bay Area by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Missoula to San Francisco Bay Area?

    Currently, July is the cheapest month in which you can book a flight from Missoula to San Francisco Bay Area (average of $41). Flying from Missoula to San Francisco Bay Area in September is currently the most expensive (average of $241). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

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Top 5 airlines flying from Missoula to San Francisco Bay Area

Discover the top 5 airlines that operate flights from Missoula to San Francisco Bay Area. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated October 13, 2025.
AirlineCheapestAverageFlexibilityOn-time
Allegiant AirCheapest$41Average$99FlexibilityNo cancel feeOn-time88%
DeltaCheapest$190Average$286FlexibilityNo cancel feeOn-timeN/A
United AirlinesCheapest$219Average$341FlexibilityNo cancel feeOn-time69%
Alaska AirlinesCheapest$219Average$437FlexibilityNo cancel feeOn-time75%
Hawaiian AirlinesCheapest$268Average$350FlexibilityNo cancel feeOn-time85%

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