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$406+ Cheap flights from Juneau to San Diego (JNU - SAN)

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 6/27. Fares are subject to change and may not be available on all flights or dates of travel.
JNU — SAN
Jun 17 — Jun 241
Tue 6/17
Tue 6/24
1 adult, Economy
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Cheap flight deals from Juneau to San Diego

Discover tips and strategies to find the most affordable flight options for your journey from Juneau (JNU) to San Diego (SAN). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated June 12, 2025.

Round-trip from

$702
(Delta)

One-way from

$406
(Alaska Airlines)
From Juneau Intl to San Diego
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One-way flight from Juneau Intl to San Diego
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Find flight deals from Juneau to San Diego

Cheapest flights from Juneau to San Diego
Explore the most affordable flight options available from Juneau to San Diego. Find the lowest fares from popular airlines and budget airlines, with prices last updated on June 12, 2025.

This Delta deal was found by Cheapflights users on 6/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 6/307:05 amJNU - SAN
1 stop6h 33mDelta
Fri 7/411:12 amSAN - JNU
1 stop7h 55mDelta
Deal found 6/11$702
This Alaska Airlines deal was found by Cheapflights users on 6/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Alaska Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 6/309:20 amJNU - SAN
2 stops10h 34mAlaska Airlines
Fri 7/412:32 pmSAN - JNU
2 stops9h 58mAlaska Airlines
Deal found 6/11$707

Cheapflights Fare Finder

Customize your flight search to find flights from Juneau to San Diego that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated June 12, 2025.
Use the filters below to find and compare flights from Juneau to San Diego that are best for you.

Fly from

Juneau

Fly to

San Diego

Route

Depart

Return

Price

JuneauSan Diego

JNU - SAN

JNUSAN

Juneau Intl

Mon 6/30

7:05 am-2:38 pm

1 stop6h 33m

San Diego

Fri 7/4

11:12 am-6:07 pm

1 stop7h 55m

$702

JuneauSan Diego

JNU - SAN

JNUSAN

Juneau Intl

Mon 6/30

9:20 am-8:54 pm

2 stops10h 34m

San Diego

Fri 7/4

12:32 pm-9:30 pm

2 stops9h 58m

$707

JuneauSan Diego

JNU - SAN

JNUSAN

Juneau Intl

Fri 6/27

9:20 am-10:55 pm

2 stops12h 35m

$406

JuneauSan Diego

JNU - SAN

JNUSAN

Juneau Intl

Fri 6/27

7:08 am-10:55 pm

1 stop14h 47m

$411

Flights are sorted by cheapest round-trip flights first.

Deals found on 6/12

Best time to book a flight from Juneau to San Diego

Have a flexible travel schedule? Discover the best time to fly to San Diego from Juneau with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Juneau to San Diego

Rainfall in San Diego by month

Plan your trip to San Diego by taking into account the average rainfall totals by month.

In terms of precipitation, rainfall in San Diego ranges from 0.0 - 2.3 inches per month. February is typically the wettest month, when rainfall can reach 2.3 in. July is typically the driest time to visit San Diego when rainfall is around 0.0 in.

Temperature in San Diego by month

Plan your trip to San Diego by taking into account the average temperature totals by month.

If weather is an important factor for your trip to San Diego, use this chart to help with planning. For those seeking warmer temperatures, August is the ideal time of year to visit, when temperatures reach an average of 71.6 F. Travelers looking to avoid the cold should look outside of January, when temperatures are typically at their lowest (around 57.2 F).

Reviews of airlines servicing San Diego

Get insights into the airlines that provide service to San Diego. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to San Diego. Reviews last updated June 12, 2025.
Alaska Airlines
8.0
Very good
10,000 reviews

Food

7.1

Boarding

8.1

Crew

8.5

Entertainment

7.1

Comfort

7.8

Overall

8.0

Reviews

1 / 20
10.0
Excellent

James,Apr 2025

LAX - SFO

Good flight except the uncontrollable cold air from the ceiling.
Alaska Airlines
8.0
Very good
10,000 reviews
Alaska Airlines
8.0
Very good
10,000 reviews

Food

7.1

Boarding

8.1

Crew

8.5

Entertainment

7.1

Comfort

7.8

Overall

8.0

Reviews

1 / 20
10.0
Excellent

James,Apr 2025

LAX - SFO

Good flight except the uncontrollable cold air from the ceiling.
Delta
8.0
Very good
7,950 reviews
Alaska Airlines
8.0
Very good
10,000 reviews

Food

7.1

Boarding

8.1

Crew

8.5

Entertainment

7.1

Comfort

7.8

Overall

8.0

Reviews

1 / 20
10.0
Excellent

James,Apr 2025

LAX - SFO

Good flight except the uncontrollable cold air from the ceiling.
American Airlines
7.2
Good
10,000 reviews
Alaska Airlines
8.0
Very good
10,000 reviews

Food

7.1

Boarding

8.1

Crew

8.5

Entertainment

7.1

Comfort

7.8

Overall

8.0

Reviews

1 / 20
10.0
Excellent

James,Apr 2025

LAX - SFO

Good flight except the uncontrollable cold air from the ceiling.

Related info for your journey

Find useful and relevant information for your journey from Juneau to San Diego. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • Can I find deals for flights from Juneau to San Diego that include hotel bookings?

    Yes. In addition to deals on Juneau to San Diego flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Juneau to San Diego?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Juneau to San Diego.

  • Can I find deals for business class flights from Juneau to San Diego?

    Yes. Cheapflights offers flight deals from Juneau to San Diego by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Juneau to San Diego?

    Currently, August is the cheapest month in which you can book a flight from Juneau to San Diego (average of $286). Flying from Juneau to San Diego in March is currently the most expensive (average of $366). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Traveling to a place near Juneau?

Book flights to Juneau if you plan to visit one of these locations
El Cajon
Chula Vista
National City
Imperial Beach
La Mesa
Alpine
Lemon Grove
Poway
Santee
Coronado

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