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$603+ Cheap flights from Madison to Juneau (MSN - JNU)

This is the cheapest round-trip flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 9/27. Fares are subject to change and may not be available on all flights or dates of travel.
MSN — JNU
Aug 3 — Aug 101
Sun 8/3
Sun 8/10
1 adult, Economy
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Cheap flight deals from Madison to Juneau

Discover tips and strategies to find the most affordable flight options for your journey from Madison (MSN) to Juneau (JNU). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated July 29, 2025.

Round-trip from

$603
(Delta)
From Madison Truax Field to Juneau Intl
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Find flight deals from Madison to Juneau

Cheapest flights from Madison to Juneau
Explore the most affordable flight options available from Madison to Juneau. Find the lowest fares from popular airlines and budget airlines, with prices last updated on July 29, 2025.

This Delta deal was found by Cheapflights users on 7/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 9/279:27 amMSN - JNU
2 stops11h 46mDelta
Wed 10/17:05 amJNU - MSN
2 stops12h 29mDelta
Deal found 7/27$603
This American Airlines deal was found by Cheapflights users on 7/26. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 9/2712:50 pmMSN - JNU
2 stops22h 44mAmerican Airlines
Wed 10/15:00 amJNU - MSN
2 stops15h 27mAmerican Airlines
Deal found 7/26$710
This Alaska Airlines deal was found by Cheapflights users on 7/27. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Alaska Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 9/277:15 amMSN - JNU
3 stops17h 14mAlaska Airlines
Wed 10/17:13 amJNU - MSN
3 stops23h 46mAlaska Airlines
Deal found 7/27$850

Cheapflights Fare Finder

 
Customize your flight search to find flights from Madison to Juneau that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated July 29, 2025.
Use the filters below to find and compare flights from Madison to Juneau that are best for you.

Fly from

Madison

Fly to

Juneau

Route

Depart

Return

Price

MadisonJuneau

MSN - JNU

MSNJNU

Madison Truax Field

Sat 9/27

9:27 am-6:13 pm

2 stops11h 46m

Juneau Intl

Wed 10/1

7:05 am-10:34 pm

2 stops12h 29m

$603

MadisonJuneau

MSN - JNU

MSNJNU

Madison Truax Field

Sat 9/27

12:50 pm-8:34 am

2 stops22h 44m

Juneau Intl

Wed 10/1

5:00 am-11:27 pm

2 stops15h 27m

$710

MadisonJuneau

MSN - JNU

MSNJNU

Madison Truax Field

Sat 9/27

7:15 am-9:29 pm

3 stops17h 14m

Juneau Intl

Wed 10/1

7:13 am-9:59 am

3 stops23h 46m

$850

Flights are sorted by cheapest round-trip flights first.

Deals found on 7/27

Best time to book a flight from Madison to Juneau

Have a flexible travel schedule? Discover the best time to fly to Juneau from Madison with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Reviews of airlines servicing Juneau

Get insights into the airlines that provide service to Juneau. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Juneau. Reviews last updated July 29, 2025.
Read reviews from past customers who have flown Alaska Airlines, Delta, and American Airlines from Madison to Juneau. Users can see the overall rating for each airline as well as how each is rated in terms of entertainment options, comfort, food, crew/service, and boarding process.
Alaska Airlines
8.0
Very good
10,000 reviews

Comfort

7.8

Entertainment

7.1

Boarding

8.1

Food

7.1

Crew

8.5

Overall

8.0

Reviews

1 / 20
10.0
Excellent

Jonathan,Jul 2025

SEA - BOS

Fantastic Check-in with easy baggage drop. While it took a while to find out which was the gate, the boarding was a dream, the stewards were simply incredible and the flight fantastic.
Alaska Airlines
8.0
Very good
10,000 reviews
Alaska Airlines
8.0
Very good
10,000 reviews

Comfort

7.8

Entertainment

7.1

Boarding

8.1

Food

7.1

Crew

8.5

Overall

8.0

Reviews

1 / 20
10.0
Excellent

Jonathan,Jul 2025

SEA - BOS

Fantastic Check-in with easy baggage drop. While it took a while to find out which was the gate, the boarding was a dream, the stewards were simply incredible and the flight fantastic.
Delta
8.0
Very good
7,977 reviews
Alaska Airlines
8.0
Very good
10,000 reviews

Comfort

7.8

Entertainment

7.1

Boarding

8.1

Food

7.1

Crew

8.5

Overall

8.0

Reviews

1 / 20
10.0
Excellent

Jonathan,Jul 2025

SEA - BOS

Fantastic Check-in with easy baggage drop. While it took a while to find out which was the gate, the boarding was a dream, the stewards were simply incredible and the flight fantastic.
American Airlines
7.2
Good
10,000 reviews
Alaska Airlines
8.0
Very good
10,000 reviews

Comfort

7.8

Entertainment

7.1

Boarding

8.1

Food

7.1

Crew

8.5

Overall

8.0

Reviews

1 / 20
10.0
Excellent

Jonathan,Jul 2025

SEA - BOS

Fantastic Check-in with easy baggage drop. While it took a while to find out which was the gate, the boarding was a dream, the stewards were simply incredible and the flight fantastic.

Related info for your journey

Find useful and relevant information for your journey from Madison to Juneau. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What are the cheapest airlines flying from Madison to Juneau round-trip?

    According to our current data, Delta ($603), American Airlines ($710), and Alaska Airlines ($850) offers the cheapest pricing from Madison to Juneau.

  • Can I find deals for flights from Madison to Juneau that include hotel bookings?

    Yes. In addition to deals on Madison to Juneau flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Madison to Juneau?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Madison to Juneau.

  • Can I find deals for business class flights from Madison to Juneau?

    Yes. Cheapflights offers flight deals from Madison to Juneau by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Madison to Juneau?

    Currently, September is the cheapest month in which you can book a flight from Madison to Juneau (average of $399). Flying from Madison to Juneau in July is currently the most expensive (average of $690). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

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Top airline flying from Madison to Juneau

Discover the top airline that operate flights from Madison to Juneau. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated July 29, 2025.
AirlineCheapestAverageFlexibilityOn-time
Alaska AirlinesCheapest$809Average$1,216FlexibilityNo cancel feeOn-time75%

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