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$507+ Cheap flights from Boise to Juneau (BOI - JNU)

This is the cheapest round-trip flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 9/25. Fares are subject to change and may not be available on all flights or dates of travel.
BOI — JNU
Oct 11 — Oct 181
Sat 10/11
Sat 10/18
1 adult, Economy
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Cheap flight deals from Boise to Juneau

Discover tips and strategies to find the most affordable flight options for your journey from Boise (BOI) to Juneau (JNU). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated September 11, 2025.

Round-trip from

$507
(Delta)
From Boise Air Term. Gowen Fld to Juneau Intl
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Find flight deals from Boise to Juneau

Cheapest flights from Boise to Juneau
Explore the most affordable flight options available from Boise to Juneau. Find the lowest fares from popular airlines and budget airlines, with prices last updated on September 11, 2025.

This Delta deal was found by Cheapflights users on 9/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 9/252:05 pmBOI - JNU
1 stop6h 08mDelta
Mon 9/297:05 amJNU - BOI
1 stop6h 35mDelta
Deal found 9/9$507
This Alaska Airlines deal was found by Cheapflights users on 9/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Alaska Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 9/258:46 pmBOI - JNU
2 stops26h 43mAlaska Airlines
Mon 9/299:18 amJNU - BOI
3 stops12h 50mAlaska Airlines
Deal found 9/9$577
This Delta deal was found by Cheapflights users on 9/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Delta is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 9/1711:00 amBOI - JNU
1 stop9h 13mDelta
Fri 9/197:05 amJNU - BOI
1 stop11h 15mDelta
Deal found 9/9$996
This Alaska Airlines deal was found by Cheapflights users on 9/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Alaska Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 9/178:00 amBOI - JNU
1 stop7h 14mAlaska Airlines
Fri 9/196:50 pmJNU - BOI
2 stops10h 30mAlaska Airlines
Deal found 9/9$1,099
This Hawaiian Airlines deal was found by Cheapflights users on 9/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Hawaiian Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 9/148:00 amBOI - JNU
1 stop5h 36mHawaiian Airlines
Tue 9/167:00 amJNU - BOI
1 stop6h 54mHawaiian Airlines
Deal found 9/10$1,548
This Alaska Airlines deal was found by Cheapflights users on 9/11. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Alaska Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 9/2611:22 amBOI - JNU
3 stops10h 36mAlaska Airlines
Tue 9/309:18 amJNU - BOI
3 stops8h 48mAlaska Airlines
Deal found 9/11$1,738

Cheapflights Fare Finder

 
Customize your flight search to find flights from Boise to Juneau that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated September 11, 2025.
Use the filters below to find and compare flights from Boise to Juneau that are best for you.

Fly from

Boise

Fly to

Juneau

Route

Depart

Return

Price

BoiseJuneau

BOI - JNU

BOIJNU

Boise Air Term. Gowen Fld

Thu 9/25

2:05 pm-6:13 pm

1 stop6h 08m

Juneau Intl

Mon 9/29

7:05 am-3:40 pm

1 stop6h 35m

$507

BoiseJuneau

BOI - JNU

BOIJNU

Boise Air Term. Gowen Fld

Fri 9/26

2:05 pm-6:13 pm

1 stop6h 08m

Juneau Intl

Tue 9/30

7:05 am-6:16 pm

1 stop9h 11m

$507

BoiseJuneau

BOI - JNU

BOIJNU

Boise Air Term. Gowen Fld

Thu 9/25

8:46 pm-9:29 pm

2 stops26h 43m

Juneau Intl

Mon 9/29

9:18 am-12:08 am

3 stops12h 50m

$577

BoiseJuneau

BOI - JNU

BOIJNU

Boise Air Term. Gowen Fld

Fri 9/26

8:42 pm-9:29 pm

2 stops26h 47m

Juneau Intl

Tue 9/30

9:18 am-12:08 am

3 stops12h 50m

$577

Flights are sorted by cheapest round-trip flights first.

Deals found on 9/9

Best time to book a flight from Boise to Juneau

Have a flexible travel schedule? Discover the best time to fly to Juneau from Boise with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Boise to Juneau

What is the cheapest time of day to fly from BOI to JNU?

Find hourly flight availability from Boise to Juneau. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated September 11, 2025.

When flying from Boise to Juneau, the time of day you fly usually plays a role in the price. Save by searching for a flight at noon, which can drop the price by up to 19% versus a flight in the morning.

Reviews of airlines servicing Juneau

Get insights into the airlines that provide service to Juneau. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to Juneau. Reviews last updated September 11, 2025.
Get a feel of what it's like to fly with Alaska Airlines and Delta from Boise to Juneau by reading reviews from past customers. Users have also rated airlines in terms of entertainment options, comfort, food, crew/service, and boarding process.
Alaska Airlines
8.0
Very good
10,000 reviews

Boarding

8.1

Entertainment

7.0

Comfort

7.8

Food

7.1

Crew

8.5

Overall

8.0

Reviews

1 / 20
6.0
Good

Hannah,Aug 2025

SFO - SAN

Ticket said TSA pre check, but then the TSA agent said that Alaska Airlines has not actually entered the pre check information for the ticket, so I had to use regular security. During boarding, I have a disability and need to board early. The Alaska Airlines employee announced disability boarding, but then immediately announced 2 other groups to board, so I still had to fight the crowds. On the plane, the stewardess was brusk and rude. Seats were very uncomfortable, especially on lower back.
Alaska Airlines
8.0
Very good
10,000 reviews
Alaska Airlines
8.0
Very good
10,000 reviews

Boarding

8.1

Entertainment

7.0

Comfort

7.8

Food

7.1

Crew

8.5

Overall

8.0

Reviews

1 / 20
6.0
Good

Hannah,Aug 2025

SFO - SAN

Ticket said TSA pre check, but then the TSA agent said that Alaska Airlines has not actually entered the pre check information for the ticket, so I had to use regular security. During boarding, I have a disability and need to board early. The Alaska Airlines employee announced disability boarding, but then immediately announced 2 other groups to board, so I still had to fight the crowds. On the plane, the stewardess was brusk and rude. Seats were very uncomfortable, especially on lower back.
Delta
8.0
Very good
7,960 reviews
Alaska Airlines
8.0
Very good
10,000 reviews

Boarding

8.1

Entertainment

7.0

Comfort

7.8

Food

7.1

Crew

8.5

Overall

8.0

Reviews

1 / 20
6.0
Good

Hannah,Aug 2025

SFO - SAN

Ticket said TSA pre check, but then the TSA agent said that Alaska Airlines has not actually entered the pre check information for the ticket, so I had to use regular security. During boarding, I have a disability and need to board early. The Alaska Airlines employee announced disability boarding, but then immediately announced 2 other groups to board, so I still had to fight the crowds. On the plane, the stewardess was brusk and rude. Seats were very uncomfortable, especially on lower back.

Related info for your journey

Find useful and relevant information for your journey from Boise to Juneau. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • How long is the flight from Boise to Juneau?

    Delta can get you from Boise to Juneau in just under 6h 08m. Your travel time can differ by up to . The distance from Boise to Juneau is about 1287 mi.

  • What are the cheapest airlines flying from Boise to Juneau round-trip?

    According to our current data, Alaska Airlines ($224), and Delta ($389) offers the cheapest pricing from Boise to Juneau.

  • Can I find deals for flights from Boise to Juneau that include hotel bookings?

    Yes. In addition to deals on Boise to Juneau flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Boise to Juneau?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Boise to Juneau.

  • Can I find deals for business class flights from Boise to Juneau?

    Yes. Cheapflights offers flight deals from Boise to Juneau by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Boise to Juneau?

    Currently, September is the cheapest month in which you can book a flight from Boise to Juneau (average of $399). Flying from Boise to Juneau in July is currently the most expensive (average of $690). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

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Top 2 airlines flying from Boise to Juneau

Discover the top 2 airlines that operate flights from Boise to Juneau. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated September 11, 2025.
AirlineCheapestAverageFlexibilityOn-time
Alaska AirlinesCheapest$224Average$617FlexibilityNo cancel feeOn-time75%
DeltaCheapest$389Average$493FlexibilityNo cancel feeOn-timeN/A

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