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San Juan

$315+ Cheap flights from Missoula (MSO) to San Juan

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 6/4. Fares are subject to change and may not be available on all flights or dates of travel.
MSO — SJU
Apr 12 — Apr 191
Min 4/12
Min 4/19
1 adult, Economy
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Cheap flight deals from Missoula to San Juan

Cheapest flights from Missoula to San Juan
Explore the most affordable flight options available from Missoula to San Juan. Find the lowest fares from popular airlines and budget airlines, with prices last updated on Maret 13, 2026.

This United Airlines deal was found by Cheapflights users on 3/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Min 5/36:15 am
MSO
-
SJU
1 stop9h 23m
United Airlines
Kam 5/71:00 am
SJU
-
MSO
2 stops14h 35m
United Airlines
Deal found 3/9$564
This United Airlines deal was found by Cheapflights users on 3/12. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sen 9/286:15 am
MSO
-
SJU
1 stop9h 15m
United Airlines
Sen 10/51:05 am
SJU
-
MSO
2 stops12h 29m
United Airlines
Deal found 3/12$566
This American Airlines deal was found by Cheapflights users on 3/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sen 5/41:08 pm
MSO
-
SJU
2 stops20h 55m
American Airlines
Sen 8/317:05 pm
SJU
-
MSO
2 stops19h 56m
American Airlines
Deal found 3/10$573
This American Airlines deal was found by Cheapflights users on 3/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Rab 12/301:18 pm
MSO
-
SJU
2 stops19h 21m
American Airlines
Sab 1/97:12 pm
SJU
-
MSO
2 stops20h 38m
American Airlines
Deal found 3/9$587
This American Airlines deal was found by Cheapflights users on 3/12. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sen 9/281:50 pm
MSO
-
SJU
2 stops20h 50m
American Airlines
Sel 10/65:50 pm
SJU
-
MSO
2 stops20h 49m
American Airlines
Deal found 3/12$602
This American Airlines deal was found by Cheapflights users on 3/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Min 5/36:45 am
MSO
-
SJU
1 stop14h 17m
American Airlines
Jum 5/86:45 am
SJU
-
MSO
1 stop17h 00m
American Airlines
Deal found 3/9$605
This American Airlines deal was found by Cheapflights users on 3/13. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Min 8/161:51 pm
MSO
-
SJU
2 stops19h 18m
American Airlines
Min 8/233:00 pm
SJU
-
MSO
1 stop10h 28m
American Airlines
Deal found 3/13$634
This United Airlines deal was found by Cheapflights users on 3/10. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sen 4/276:15 am
MSO
-
SJU
1 stop9h 23m
United Airlines
Rab 4/291:00 am
SJU
-
MSO
2 stops14h 35m
United Airlines
Deal found 3/10$636
This American Airlines deal was found by Cheapflights users on 3/12. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Min 5/36:45 am
MSO
-
SJU
1 stop19h 47m
American Airlines
Kam 5/76:45 am
SJU
-
MSO
1 stop17h 00m
American Airlines
Deal found 3/12$640
This United Airlines deal was found by Cheapflights users on 3/12. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sen 9/286:15 am
MSO
-
SJU
1 stop9h 15m
United Airlines
Sel 10/61:05 am
SJU
-
MSO
2 stops12h 29m
United Airlines
Deal found 3/12$656

Find flight deals from Missoula to San Juan

Discover tips and strategies to find the most affordable flight options for your journey from Missoula (MSO) to San Juan (PR1). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated Maret 13, 2026.

Round-trip from

$564
(United Airlines)

One-way from

$315
(Kiwi.com)

Popular in

December

Cheapest in

October

Average price

$848
From Missoula Johnson-Bell Field to San Juan
Search Deals
One-way flight from Missoula Johnson-Bell Field to San Juan
Search Deals
Highest demand for flights based on searches. 25% potential increase in price ($250 potential increase over avg. RT price).
Search Deals
Cheapest flight prices on average. 10% potential price decrease ($75 potential savings vs. average RT price).
Search Deals
Average for round-trip flights in March 2026
Search Deals

Cheapflights Fare Finder

 
Customize your flight search to find flights from Missoula to San Juan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated Maret 13, 2026.
Use the filters below to find and compare flights from Missoula to San Juan that are best for you.

Fly from

Fly to

Route

Depart

Return

Price

Cheapest round-trip

MissoulaSan Juan

MSO - SJU

MSOSJU

Missoula Johnson-Bell Field

Min 5/3

6:15 am-8:38 pm

2 stops12h 23m

San Juan Luis Munoz Marin Intl

Kam 5/7

1:00 am-1:35 pm

2 stops14h 35m

$604

MissoulaSan Juan

MSO - SJU

MSOSJU

Missoula Johnson-Bell Field

Min 8/16

1:51 pm-11:09 am

2 stops19h 18m

San Juan Luis Munoz Marin Intl

Min 8/23

3:00 pm-11:28 pm

1 stop10h 28m

$634
Quickest round-trip

MissoulaSan Juan

MSO - SJU

MSOSJU

Missoula Johnson-Bell Field

Sen 4/27

6:15 am-5:38 pm

1 stop9h 23m

San Juan Luis Munoz Marin Intl

Kam 4/30

1:40 pm-9:30 pm

1 stop9h 50m

$676

MissoulaSan Juan

MSO - SJU

MSOSJU

Missoula Johnson-Bell Field

Min 5/3

6:15 am-3:42 pm

3 stops31h 27m

San Juan Luis Munoz Marin Intl

Rab 5/6

1:00 am-1:35 pm

2 stops14h 35m

$747
Cheapest one-way
Quickest one-way

MissoulaSan Juan

MSO - SJU

MSOSJU

Missoula Johnson-Bell Field

Kam 6/4

6:15 am-5:38 pm

1 stop9h 23m

$398

MissoulaSan Juan

MSO - SJU

MSOSJU

Missoula Johnson-Bell Field

Kam 6/4

10:25 am-5:26 pm

2 stops29h 01m

$411

Flights are sorted by cheapest round-trip flights first.

Deals found on 3/12

Sorted by cheapest first

Best time to book a flight from Missoula to San Juan

Have a flexible travel schedule? Discover the best time to fly to San Juan from Missoula with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Missoula to San Juan
No data available for this route at this time. Please check back soon.

Reviews of airlines servicing San Juan

Get insights into the airlines that provide service to San Juan. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to San Juan. Reviews last updated Maret 13, 2026.
Read through reviews of airlines operating flights from Missoula to San Juan, such as United Airlines. Reviews also offer insight into each airline's entertainment options, comfort, food, crew/service, and boarding process.
United Airlines
7.4
Good
9,418 reviews

Overall

7.4

Food

6.6

Comfort

7.3

Boarding

7.7

Entertainment

7.1

Crew

8.1

Reviews

1 / 20
10.0
Excellent

Dane,Jan 2026

TYS - IAD

It was a short flight, so no time for amenities. Just glad everything was quick and easy from boarding to arriving at my destination with my family
United Airlines
7.4
Good
9,418 reviews
United Airlines
7.4
Good
9,418 reviews

Overall

7.4

Food

6.6

Comfort

7.3

Boarding

7.7

Entertainment

7.1

Crew

8.1

Reviews

1 / 20
10.0
Excellent

Dane,Jan 2026

TYS - IAD

It was a short flight, so no time for amenities. Just glad everything was quick and easy from boarding to arriving at my destination with my family

Related info for your journey

Find useful and relevant information for your journey from Missoula to San Juan. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly from for flights from Missoula to San Juan?

    Missoula Johnson-Bell Field (MSO) is the airport you will fly out of if you book a flight from Missoula to San Juan. You should not have trouble finding flights to San Juan from Johnson-Bell Field; the airport handles an average of 0 outbound flights to San Juan per day. You should also have plenty of airline options to choose from since 1 airline has flights from the Missoula airport to San Juan. It is only a 5.5 mi journey to Johnson-Bell Field (MSO) from Missoula’s city center.

  • How long is the flight from Missoula to San Juan?

    For as low as $604, United Airlines can have you in San Juan from Missoula in 12h 23m. There are 3342 mi between Missoula and San Juan. Both multi-stop and nonstop flights can be found to your destination and back.

  • What is the cheapest airline to fly from Missoula to San Juan round-trip?

    According to our current data, United Airlines ($442), offers the cheapest pricing from Missoula to San Juan. Users have found that United Airlines is 41% cheaper than the other options available to this destination.

  • Can I find deals for flights from Missoula to San Juan that include hotel bookings?

    Yes. In addition to deals on Missoula to San Juan flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Missoula to San Juan?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Missoula to San Juan.

  • Can I find deals for business class flights from Missoula to San Juan?

    Yes. Cheapflights offers flight deals from Missoula to San Juan by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

See more FAQs

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Alternative routes for Missoula to San Juan

See prices for flight routes from nearby airports that may be better suited for you.
Bozeman to Luis Munoz Marin Intl flights

Top airline flying from Missoula to San Juan

Discover the top airline that operate flights from Missoula to San Juan. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated Maret 13, 2026.
AirlineCheapestAverageFlexibilityOn-time
United AirlinesCheapest$442Average$735FlexibilityNo cancel feeOn-time69%

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