$148+ Cheap flights from Houston to San Juan
This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 8/11. Fares are subject to change and may not be available on all flights or dates of travel.
HOU — SJU
Jun 23 — Jun 301
Round-trip
1 adult, Economy
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Find cheap flights from Houston to San Juan with Cheapflights
1. Tell us where you want to go
Enter your travel information like dates, passengers, trip type (one-way or round trip), and preferred cabin class then click “Find deals”2. Select your favorite providers
We find the providers serving your travel needs. Choose up to four travel providers to compare side-by-side for flights, hotels, or car rentals.3. Compare prices and book
Review each provider’s pricing and select the best option for you! Book through your favorite provider’s website for a seamless experience.Cheapflights Tip: The best prices from Houston to San Juan are usually found in October or August, booked 52 days in advance, depart on a Thursday or Monday and return on a Friday
Cheap flight deals from Houston to San Juan
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Best
Last-minute
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Cheapest flights from Houston to San JuanExplore the most affordable flight options available from Houston to San Juan. Find the lowest fares from popular airlines and budget airlines, with prices last updated on May 24, 2026.
Explore the most affordable flight options available from Houston to San Juan. Find the lowest fares from popular airlines and budget airlines, with prices last updated on May 24, 2026.
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 8/188:29 am
IAH
- SJU
1 stop30h 29m
Frontier
Tue 8/256:41 pm
SJU
- IAH
1 stop17h 53m
Frontier
Deal found 5/19![Frontier logo]()
$296
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 8/188:29 am
IAH
- SJU
1 stop30h 29m
Frontier
Wed 8/266:41 pm
SJU
- IAH
1 stop17h 53m
Frontier
Deal found 5/19![Frontier logo]()
$301
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 8/238:29 am
IAH
- SJU
1 stop30h 29m
Frontier
Wed 8/266:41 pm
SJU
- IAH
1 stop17h 53m
Frontier
Deal found 5/19![Frontier logo]()
$305
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 9/288:36 am
IAH
- SJU
1 stop14h 02m
Frontier
Wed 10/79:05 pm
SJU
- IAH
1 stop12h 40m
Frontier
Deal found 5/19![Frontier logo]()
$307
This Kiwi.com deal was found by Cheapflights users on 5/23. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 8/188:29 am
IAH
- SJU
1 stop30h 29m
Frontier
Mon 8/246:41 pm
SJU
- IAH
1 stop17h 53m
Frontier
Deal found 5/23![Frontier logo]()
$322
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 8/318:37 pm
IAH
- SJU
1 stop19h 59m
Frontier
Wed 9/91:59 am
SJU
- IAH
2 stops14h 07m
Frontier
Deal found 5/19![Frontier logo]()
$323
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 8/198:29 am
IAH
- SJU
1 stop30h 29m
Frontier
Mon 8/246:00 am
SJU
- IAH
2 stops26h 19m
Frontier
Deal found 5/19![Frontier logo]()
$326
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 9/28:42 pm
IAH
- SJU
1 stop16h 33m
Frontier
Wed 9/99:05 pm
SJU
- IAH
1 stop12h 40m
Frontier
Deal found 5/19![Frontier logo]()
$329
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 8/88:37 pm
IAH
- SJU
1 stop26h 51m
Frontier
Sun 8/166:00 am
SJU
- IAH
2 stops50h 19m
Frontier
Deal found 5/19![Frontier logo]()
$330
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 9/297:00 am
IAH
- SJU
1 stop7h 25m
Frontier
Wed 10/79:05 pm
SJU
- IAH
1 stop12h 40m
Frontier
Deal found 5/19![Frontier logo]()
$331
This Kiwi.com deal was found by Cheapflights users on 5/20. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 8/198:29 am
IAH
- SJU
1 stop30h 29m
Frontier
Tue 8/256:00 am
SJU
- IAH
2 stops17h 48m
Frontier
Deal found 5/20![Frontier logo]()
$332
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 9/18:29 am
IAH
- SJU
2 stops28h 46m
Frontier
Tue 9/86:00 am
SJU
- IAH
1 stop9h 51m
Frontier
Deal found 5/19![Frontier logo]()
$335
Best flights from Houston to San JuanDiscover carefully curated flight deals from Houston to San Juan that have cost, travel time, and layovers in mind to ensure you get the best travel experience. Data last updated May 24, 2026.
Discover carefully curated flight deals from Houston to San Juan that have cost, travel time, and layovers in mind to ensure you get the best travel experience. Data last updated May 24, 2026.
This JetBlue deal was found by Cheapflights users on 5/23. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure JetBlue is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 9/67:24 am
IAH
- SJU
1 stop6h 57m
JetBlue
Fri 9/114:30 pm
SJU
- IAH
1 stop7h 32m
JetBlue
Deal found 5/23![JetBlue logo]()
$411
This United Airlines deal was found by Cheapflights users on 5/23. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 9/43:06 pm
IAH
- SJU
Nonstop4h 32m
United Airlines
Tue 9/83:00 pm
SJU
- IAH
Nonstop4h 48m
United Airlines
Deal found 5/23![United Airlines logo]()
$457
This Southwest deal was found by Cheapflights users on 5/22. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 8/102:40 pm
HOU
- SJU
2 stops8h 10m
Southwest
Wed 8/128:20 am
SJU
- HOU
2 stops9h 30m
Southwest
Deal found 5/22![Southwest logo]()
$466
This JetBlue deal was found by Cheapflights users on 5/23. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure JetBlue is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 9/101:00 pm
IAH
- SJU
1 stop9h 58m
JetBlue
Fri 9/114:30 pm
SJU
- IAH
1 stop7h 32m
JetBlue
Deal found 5/23![JetBlue logo]()
$424
This United Airlines deal was found by Cheapflights users on 5/23. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 8/263:06 pm
IAH
- SJU
Nonstop4h 32m
United Airlines
Mon 8/317:00 am
SJU
- IAH
Nonstop4h 45m
United Airlines
Deal found 5/23![United Airlines logo]()
$457
This Southwest deal was found by Cheapflights users on 5/18. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 7/167:05 pm
HOU
- SJU
Nonstop4h 25m
Southwest
Tue 7/218:35 pm
SJU
- HOU
2 stops14h 10m
Southwest
Deal found 5/18![Southwest logo]()
$502
This United Airlines deal was found by Cheapflights users on 5/22. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 9/310:10 am
IAH
- SJU
Nonstop4h 32m
United Airlines
Sun 9/67:00 am
SJU
- IAH
Nonstop4h 45m
United Airlines
Deal found 5/22![United Airlines logo]()
$491
This Southwest deal was found by Cheapflights users on 5/22. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 7/196:30 pm
HOU
- SJU
Nonstop4h 25m
Southwest
Tue 7/217:20 pm
SJU
- HOU
2 stops15h 25m
Southwest
Deal found 5/22![Southwest logo]()
$502
This Southwest deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 7/810:30 am
HOU
- SJU
1 stop12h 15m
Southwest
Tue 7/148:35 pm
SJU
- HOU
1 stop12h 25m
Southwest
Deal found 5/19![Southwest logo]()
$506
This United Airlines deal was found by Cheapflights users on 5/22. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 8/203:06 pm
IAH
- SJU
Nonstop4h 32m
United Airlines
Sun 8/237:00 am
SJU
- IAH
Nonstop4h 45m
United Airlines
Deal found 5/22![United Airlines logo]()
$547
This Southwest deal was found by Cheapflights users on 5/20. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 7/137:05 pm
HOU
- SJU
Nonstop4h 25m
Southwest
Wed 7/156:30 am
SJU
- HOU
Nonstop4h 35m
Southwest
Deal found 5/20![Southwest logo]()
$532
This United Airlines deal was found by Cheapflights users on 5/23. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 8/103:03 pm
IAH
- SJU
Nonstop4h 35m
United Airlines
Sat 8/152:55 pm
SJU
- IAH
Nonstop4h 48m
United Airlines
Deal found 5/23![United Airlines logo]()
$547
This Southwest deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 7/77:20 pm
HOU
- SJU
Nonstop4h 25m
Southwest
Tue 7/148:35 pm
SJU
- HOU
1 stop12h 25m
Southwest
Deal found 5/19![Southwest logo]()
$537
This United Airlines deal was found by Cheapflights users on 5/22. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 7/1811:56 pm
IAH
- SJU
Nonstop4h 33m
United Airlines
Mon 7/202:05 am
SJU
- IAH
Nonstop4h 56m
United Airlines
Deal found 5/22![United Airlines logo]()
$547
This Southwest deal was found by Cheapflights users on 5/18. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 6/122:40 pm
HOU
- SJU
1 stop7h 55m
Southwest
Wed 6/177:20 pm
SJU
- HOU
2 stops15h 25m
Southwest
Deal found 5/18![Southwest logo]()
$541
This United Airlines deal was found by Cheapflights users on 5/21. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 7/153:03 pm
IAH
- SJU
Nonstop4h 35m
United Airlines
Sun 7/197:00 am
SJU
- IAH
Nonstop4h 53m
United Airlines
Deal found 5/21![United Airlines logo]()
$547
This Southwest deal was found by Cheapflights users on 5/20. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 6/1911:50 am
HOU
- SJU
1 stop11h 25m
Southwest
Sun 6/219:05 pm
SJU
- HOU
1 stop12h 20m
Southwest
Deal found 5/20![Southwest logo]()
$541
This United Airlines deal was found by Cheapflights users on 5/22. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 9/113:06 pm
IAH
- SJU
Nonstop4h 32m
United Airlines
Wed 9/163:00 pm
SJU
- IAH
Nonstop4h 48m
United Airlines
Deal found 5/22![United Airlines logo]()
$547
This Southwest deal was found by Cheapflights users on 5/21. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 6/87:00 pm
HOU
- SJU
Nonstop4h 25m
Southwest
Fri 6/128:15 pm
SJU
- HOU
1 stop12h 30m
Southwest
Deal found 5/21![Southwest logo]()
$547
This United Airlines deal was found by Cheapflights users on 5/23. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 9/53:06 pm
IAH
- SJU
Nonstop4h 32m
United Airlines
Tue 9/83:00 pm
SJU
- IAH
Nonstop4h 48m
United Airlines
Deal found 5/23![United Airlines logo]()
$547
This United Airlines deal was found by Cheapflights users on 5/20. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 6/3011:56 pm
IAH
- SJU
Nonstop4h 33m
United Airlines
Thu 7/22:05 am
SJU
- IAH
Nonstop4h 56m
United Airlines
Deal found 5/20![United Airlines logo]()
$547
This Southwest deal was found by Cheapflights users on 5/21. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Southwest is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 6/65:05 pm
HOU
- SJU
1 stop7h 10m
Southwest
Sat 6/136:30 am
SJU
- HOU
2 stops8h 20m
Southwest
Deal found 5/21![Southwest logo]()
$591
Last-minute flights from Houston to San JuanDiscover last-minute flight deals from Houston to San Juan. Data last updated May 24, 2026 and is based on user searches.
Discover last-minute flight deals from Houston to San Juan. Data last updated May 24, 2026 and is based on user searches.
This Frontier deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Frontier is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 6/312:57 pm
IAH
- SJU
1 stop7h 55m
Frontier
Tue 6/96:00 am
SJU
- IAH
1 stop13h 29m
Frontier
Deal found 5/19![Frontier logo]()
$396
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 6/312:57 pm
IAH
- SJU
1 stop7h 55m
Frontier
Fri 6/128:50 am
SJU
- IAH
1 stop12h 02m
Frontier
Deal found 5/19![Frontier logo]()
$398
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 6/312:57 pm
IAH
- SJU
1 stop7h 55m
Frontier
Mon 6/87:00 am
SJU
- IAH
2 stops25h 23m
Frontier
Deal found 5/19![Frontier logo]()
$412
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 6/510:51 am
IAH
- SJU
1 stop12h 08m
Frontier
Tue 6/96:00 am
SJU
- IAH
1 stop13h 29m
Frontier
Deal found 5/19![Frontier logo]()
$409
This Kiwi.com deal was found by Cheapflights users on 5/23. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 6/98:18 am
IAH
- SJU
1 stop15h 26m
Frontier
Tue 6/163:06 am
SJU
- IAH
1 stop6h 41m
Frontier
Deal found 5/23![Frontier logo]()
$410
This Kiwi.com deal was found by Cheapflights users on 5/20. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 6/108:55 pm
IAH
- SJU
2 stops40h 34m
Frontier
Wed 6/177:30 am
SJU
- IAH
1 stop25h 32m
Frontier
Deal found 5/20![Frontier logo]()
$401
This Frontier deal was found by Cheapflights users on 5/23. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Frontier is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 6/1010:36 am
IAH
- SJU
1 stop12h 20m
Frontier
Thu 6/186:00 am
SJU
- IAH
1 stop10h 27m
Frontier
Deal found 5/23![Frontier logo]()
$416
This Kiwi.com deal was found by Cheapflights users on 5/20. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 6/158:20 am
IAH
- SJU
2 stops42h 37m
Frontier
Tue 6/235:15 pm
SJU
- IAH
1 stop15h 08m
Frontier
Deal found 5/20![Frontier logo]()
$405
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 6/158:20 am
IAH
- SJU
2 stops42h 37m
Frontier
Tue 7/145:15 pm
SJU
- IAH
1 stop15h 05m
Frontier
Deal found 5/19![Frontier logo]()
$407
This Priceline deal was found by Cheapflights users on 5/23. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Priceline is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 6/1710:36 am
IAH
- SJU
1 stop16h 21m
Frontier
Mon 6/223:06 am
SJU
- IAH
1 stop6h 41m
Frontier
Deal found 5/23![Frontier logo]()
$376
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 6/298:47 am
IAH
- SJU
1 stop7h 46m
Frontier
Thu 7/26:00 am
SJU
- IAH
1 stop10h 27m
Frontier
Deal found 5/19![Frontier logo]()
$390
This CheapOair deal was found by Cheapflights users on 5/23. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure CheapOair is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 6/308:18 am
IAH
- SJU
1 stop15h 26m
Frontier
Fri 7/36:00 am
SJU
- IAH
1 stop9h 52m
Frontier
Deal found 5/23![Frontier logo]()
$406
One-way flights from Houston to San JuanSearch for one-way flight options from Houston to San Juan. Find affordable one-way fares based on user searches. Data last updated May 24, 2026.
Search for one-way flight options from Houston to San Juan. Find affordable one-way fares based on user searches. Data last updated May 24, 2026.
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 8/118:37 pm
IAH
- SJU
1 stop26h 51m
Frontier
Deal found 5/19![Frontier logo]()
$148
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 6/158:20 am
IAH
- SJU
2 stops42h 37m
Frontier
Deal found 5/19![Frontier logo]()
$155
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 7/49:06 pm
IAH
- SJU
1 stop26h 22m
Frontier
Deal found 5/19![Frontier logo]()
$163
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 7/148:20 am
IAH
- SJU
1 stop6h 45m
Frontier
Deal found 5/19![Frontier logo]()
$166
This Kiwi.com deal was found by Cheapflights users on 5/23. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 8/168:37 pm
IAH
- SJU
1 stop26h 51m
Frontier
Deal found 5/23![Frontier logo]()
$168
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 8/121:14 pm
IAH
- SJU
1 stop9h 15m
Frontier
Deal found 5/19![Frontier logo]()
$170
This Kiwi.com deal was found by Cheapflights users on 5/23. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 8/69:58 pm
IAH
- SJU
1 stop31h 46m
Frontier
Deal found 5/23![Frontier logo]()
$172
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 8/158:20 am
IAH
- SJU
2 stops38h 09m
Frontier
Deal found 5/19![Frontier logo]()
$176
This Kiwi.com deal was found by Cheapflights users on 5/22. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Wed 7/88:37 pm
IAH
- SJU
1 stop26h 51m
Frontier
Deal found 5/22![Frontier logo]()
$178
This Kiwi.com deal was found by Cheapflights users on 5/19. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 6/96:30 am
IAH
- SJU
2 stops30h 59m
Frontier
Deal found 5/19![Frontier logo]()
$183
This Kiwi.com deal was found by Cheapflights users on 5/21. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 8/137:23 pm
IAH
- SJU
1 stop11h 34m
Frontier
Deal found 5/21![Frontier logo]()
$184
This Kiwi.com deal was found by Cheapflights users on 5/21. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Thu 8/137:11 pm
HOU
- SJU
2 stops25h 32m
Multiple Airlines
Deal found 5/21![Multiple Airlines logo]()
$205
Find flight deals from Houston to San Juan
Discover tips and strategies to find the most affordable flight options for your journey from Houston (HO1) to San Juan (PR1). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated May 24, 2026.
Round-trip from | $296 (Kiwi.com) |
|---|---|
One-way from | $148 (Kiwi.com) |
Popular in | December |
Cheapest in | October |
Average price | $432 |
Cheapflights Fare Finder
Customize your flight search to find flights from Houston to San Juan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated May 24, 2026.
Use the filters below to find and compare flights from Houston to San Juan that are best for you.
Fly from
Fly to
Route
Depart
Return
Cheapest round-trip
HoustonSan Juan
IAH - SJU
IAHSJU
Houston George Bush Intcntl
Sun 9/6
7:24 am-3:21 pm
1 stop6h 57m
San Juan Luis Munoz Marin Intl
Fri 9/11
4:30 pm-11:02 pm
1 stop7h 32m
$411
HoustonSan Juan
IAH - SJU
IAHSJU
Houston George Bush Intcntl
Thu 9/10
1:00 pm-11:58 pm
1 stop9h 58m
San Juan Luis Munoz Marin Intl
Fri 9/11
4:30 pm-11:02 pm
1 stop7h 32m
$424
HoustonSan Juan
IAH - SJU
IAHSJU
Houston George Bush Intcntl
Fri 9/4
3:06 pm-8:38 pm
Nonstop4h 32m
San Juan Luis Munoz Marin Intl
Tue 9/8
3:00 pm-6:48 pm
Nonstop4h 48m
$457
HoustonSan Juan
IAH - SJU
IAHSJU
Houston George Bush Intcntl
Wed 8/26
3:06 pm-8:38 pm
Nonstop4h 32m
San Juan Luis Munoz Marin Intl
Mon 8/31
7:00 am-10:45 am
Nonstop4h 45m
$457
HoustonSan Juan
HOU - SJU
HOUSJU
Houston Hobby
Mon 8/10
2:40 pm-11:50 pm
2 stops8h 10m
San Juan Luis Munoz Marin Intl
Wed 8/12
8:20 am-4:50 pm
2 stops9h 30m
$466
HoustonSan Juan
IAH - SJU
IAHSJU
Houston George Bush Intcntl
Thu 9/3
10:10 am-3:42 pm
Nonstop4h 32m
San Juan Luis Munoz Marin Intl
Sun 9/6
7:00 am-10:45 am
Nonstop4h 45m
$491
HoustonSan Juan
HOU - SJU
HOUSJU
Houston Hobby
Thu 7/16
7:05 pm-12:30 am
Nonstop4h 25m
San Juan Luis Munoz Marin Intl
Tue 7/21
8:35 pm-9:45 am
2 stops14h 10m
$502
HoustonSan Juan
HOU - SJU
HOUSJU
Houston Hobby
Sun 7/19
6:30 pm-11:55 pm
Nonstop4h 25m
San Juan Luis Munoz Marin Intl
Tue 7/21
7:20 pm-9:45 am
2 stops15h 25m
$502
HoustonSan Juan
HOU - SJU
HOUSJU
Houston Hobby
Wed 7/8
10:30 am-11:45 pm
1 stop12h 15m
San Juan Luis Munoz Marin Intl
Tue 7/14
8:35 pm-8:00 am
1 stop12h 25m
$506
Quickest round-trip
HoustonSan Juan
HOU - SJU
HOUSJU
Houston Hobby
Mon 7/13
7:05 pm-12:30 am
Nonstop4h 25m
San Juan Luis Munoz Marin Intl
Wed 7/15
6:30 am-10:05 am
Nonstop4h 35m
$532
Showing 1-10 of 41 resultsSorted by cheapest first
Best time to book a flight from Houston to San Juan
Have a flexible travel schedule? Discover the best time to fly to San Juan from Houston with our price prediction graph.
HO1-PR1
IAH-SJU
HOU-SJU
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.
Cheapflights Insights
Everything you need to know about your flight from Houston to San Juan
HO1-PR1
IAH-SJU
HOU-SJU
What is the cheapest month to book a flight from Houston to San Juan?
Currently, January is the cheapest month in which you can book a flight from Houston to San Juan (average of $58). Flying from Houston to San Juan in June is currently the most expensive (average of $1,024). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.
What is the cheapest time of day to fly from HOU to SJU?
Find hourly flight availability from Houston to San Juan. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated May 24, 2026.
A simple way to save on the total cost of your ticket is to fly from Houston to San Juan at noon. If you’re flexible enough to do this you can expect to save up to 18% on your trip compared to booking a flight in the morning.
How much does it cost to fly round-trip from Houston to San Juan?
How often are flights from Houston to San Juan delayed?
About 23% of weekly flights between Houston and San Juan have experienced delays in the past year, with the average delay time being 92 minutes.
What is the most punctual flight time for Houston to San Juan flights?
Historically, flights departing in the morning are less likely to be delayed, whereas flights leaving in the early afternoon tend to experience delays more often.
What day of the week experiences the fewest flight delays on this route?
Friday tends to have the lowest number of delays on this route, whereas Sunday has historically faced a higher average of delays compared to other days of the week.
Which airline has the best punctuality record on Houston to San Juan flights?
Over the last year, Southwest have had the lowest number of delays on this route, with just 23% of flights being delayed.
How far ahead should I book a flight from Houston to San Juan?
To ensure you get the cheapest price possible for a flight from Houston to San Juan, you should look to book at least 51 days in advance of your intended travel date. The price of your flight may increase if you delay and leave booking until a week or so before departure.
What is the cheapest day to fly from Houston to San Juan?
Use this chart to determine the cheapest time to fly round-trip from Houston to San Juan. Price data was last updated on April 11, 2026.
Travelers seeking maximum savings on their Houston to San Juan flight should consider departing on Sunday afternoons when fares are most often at their lowest. Tuesday at noon flights should be avoided if possible as fares are typically the most expensive at this time.
Reviews of airlines servicing San Juan
Get insights into the airlines that provide service to San Juan. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to San Juan. Reviews last updated May 24, 2026.
See what other customers who have flown with Southwest,United Airlines, andAmerican Airlines from Houston to San Juan have to say. You can also see how each airline compares in terms of entertainment options, comfort, food, crew/service, and boarding process.
Comfort
8.0
Overall
7.9
Crew
8.6
Boarding
8.1
Entertainment
7.5
Food
7.0
Reviews
1 / 20
2.0
MediocreDominic,Mar 2026
MCO - SMF
Comfort
8.0
Overall
7.9
Crew
8.6
Boarding
8.1
Entertainment
7.5
Food
7.0
Reviews
1 / 20
2.0
MediocreDominic,Mar 2026
MCO - SMF
Comfort
8.0
Overall
7.9
Crew
8.6
Boarding
8.1
Entertainment
7.5
Food
7.0
Reviews
1 / 20
2.0
MediocreDominic,Mar 2026
MCO - SMF
Comfort
8.0
Overall
7.9
Crew
8.6
Boarding
8.1
Entertainment
7.5
Food
7.0
Reviews
1 / 20
2.0
MediocreDominic,Mar 2026
MCO - SMF
Spirit Airlines
Comfort
8.0
Overall
7.9
Crew
8.6
Boarding
8.1
Entertainment
7.5
Food
7.0
Reviews
1 / 20
2.0
MediocreDominic,Mar 2026
MCO - SMF
Comfort
8.0
Overall
7.9
Crew
8.6
Boarding
8.1
Entertainment
7.5
Food
7.0
Reviews
1 / 20
2.0
MediocreDominic,Mar 2026
MCO - SMF
Related info for your journey
Find useful and relevant information for your journey from Houston to San Juan. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.
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Alternative routes for Houston to San Juan
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Complete your trip
Complete your trip to San Juan by adding a car rental and/or hotel reservation to your travel itinerary.
Search flights from Houston to San Juan by cabin class
Find flights from Houston to San Juan, based on your preferred cabin class, be it economy, premium economy, business, or first class.
Houston and San Juan flights
Browse other Houston and San Juan flight options. Last updated on May 24, 2026.
Popular flight searches
Check out other popular destinations found by fellow travelers in 2026
Top 6 airlines flying from Houston to San Juan
Discover the top 6 airlines that operate flights from Houston to San Juan. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated May 24, 2026.
| Airline | Cheapest | Average | Flexibility | On-time |
|---|---|---|---|---|
| Cheapest$106 | Average$273 | FlexibilityNo cancel fee | On-time65% | |
| Cheapest$108 | Average$466 | FlexibilityNo cancel fee | On-timeN/A | |
| Cheapest$132 | Average$321 | FlexibilityNo cancel fee | On-time62% | |
| Cheapest$165 | Average$511 | FlexibilityNo cancel fee | On-time63% | |
| Cheapest$170 | Average$415 | FlexibilityNo cancel fee | On-time71% | |
| Cheapest$234 | Average$547 | FlexibilityNo cancel fee | On-time69% |