HomeSearch by dateVacation packagesHotelsFlight dealsCar rentalTravel tips & news
San Juan

$116+ Cheap flights from Harrisburg (MDT) to San Juan

This is the cheapest one-way flight price found by a Cheapflights user in the last 72 hours by searching for a flight departing on 1/11. Fares are subject to change and may not be available on all flights or dates of travel.
MDT — SJU
Jan 8 — Jan 151
Thu 1/8
Thu 1/15
1 adult, Economy
We work with more than 300 partners to bring you better travel deals

Find cheap flights from Harrisburg to San Juan with Cheapflights

1. Tell us where you want to go

Enter your travel information like dates, passengers, trip type (one-way or round trip), and preferred cabin class then click “Find deals”

2. Select your favorite providers

We find the providers serving your travel needs. Choose up to four travel providers to compare side-by-side for flights, hotels, or car rentals.

3. Compare prices and book

Review each provider’s pricing and select the best option for you! Book through your favorite provider’s website for a seamless experience.

Cheap flight deals from Harrisburg to San Juan

Cheapest flights from Harrisburg to San Juan
Explore the most affordable flight options available from Harrisburg to San Juan. Find the lowest fares from popular airlines and budget airlines, with prices last updated on December 9, 2025.

This Expedia deal was found by Cheapflights users on 12/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Expedia is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 12/2310:56 amMDT - SJU
1 stop8h 31mFrontier
Mon 12/293:55 amSJU - MDT
1 stop7h 06mFrontier
Deal found 12/8$364
This United Airlines deal was found by Cheapflights users on 12/7. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 12/156:30 amMDT - SJU
2 stops13h 56mUnited Airlines
Sat 12/204:52 pmSJU - MDT
1 stop8h 15mUnited Airlines
Deal found 12/7$377
This United Airlines deal was found by Cheapflights users on 12/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 12/146:30 amMDT - SJU
2 stops13h 56mUnited Airlines
Tue 12/168:10 amSJU - MDT
1 stop9h 43mUnited Airlines
Deal found 12/8$410
This American Airlines deal was found by Cheapflights users on 12/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 12/145:00 amMDT - SJU
1 stop16h 05mAmerican Airlines
Sun 12/218:25 amSJU - MDT
1 stop11h 36mAmerican Airlines
Deal found 12/9$419
This Kiwi.com deal was found by Cheapflights users on 12/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Kiwi.com is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 12/149:30 amMDT - SJU
2 stops26h 02mMultiple Airlines
Sat 12/203:55 amSJU - MDT
1 stop7h 21mMultiple Airlines
Deal found 12/9$424
This United Airlines deal was found by Cheapflights users on 12/7. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 12/126:15 amMDT - SJU
2 stops14h 11mUnited Airlines
Sat 12/138:10 amSJU - MDT
1 stop9h 43mUnited Airlines
Deal found 12/7$438
This American Airlines deal was found by Cheapflights users on 12/9. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sat 12/1311:07 amMDT - SJU
2 stops9h 58mAmerican Airlines
Mon 12/156:25 amSJU - MDT
1 stop13h 42mAmerican Airlines
Deal found 12/9$443
This American Airlines deal was found by Cheapflights users on 12/7. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Sun 12/77:32 pmMDT - SJU
2 stops16h 58mAmerican Airlines
Sat 12/208:25 amSJU - MDT
1 stop14h 37mAmerican Airlines
Deal found 12/7$448
This Frontier deal was found by Cheapflights users on 12/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure Frontier is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Tue 12/2310:56 amMDT - SJU
1 stop8h 31mFrontier
Sat 12/279:58 pmSJU - MDT
1 stop13h 03mFrontier
Deal found 12/8$459
This United Airlines deal was found by Cheapflights users on 12/8. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure United Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Fri 12/126:15 amMDT - SJU
2 stops14h 11mUnited Airlines
Sat 12/132:05 amSJU - MDT
2 stops12h 47mUnited Airlines
Deal found 12/8$471
This American Airlines deal was found by Cheapflights users on 12/7. Clicking the “Pick Dates” button in this card will allow you to select your dates and further customize your flight criteria. From there, click “Find deals”, make sure American Airlines is selected, and click “Compare selected” under the list of providers to see comparable flight deals.
Mon 12/229:44 amMDT - SJU
1 stop13h 15mAmerican Airlines
Fri 12/268:35 pmSJU - MDT
1 stop13h 35mAmerican Airlines
Deal found 12/7$474

Find flight deals from Harrisburg to San Juan

Discover tips and strategies to find the most affordable flight options for your journey from Harrisburg (MDT) to San Juan (PR1). Learn about various techniques such as flexible date searches, comparing prices across and setting up price alerts. Use these methods to find the cheapest flights available for your travel needs. Data last updated December 9, 2025.

Round-trip from

$180
(Priceline)

One-way from

$116
(United Airlines)

Popular in

December

Cheapest in

October

Average price

$856
From Harrisburg to San Juan
Search Deals
One-way flight from Harrisburg to San Juan
Search Deals
Highest demand for flights based on searches. 9% potential increase in price ($57 potential increase over avg. RT price).
Search Deals
Cheapest flight prices on average. 5% potential price decrease ($28 potential savings vs. average RT price).
Search Deals
Average for round-trip flights in December 2025
Search Deals

Cheapflights Fare Finder

 
Customize your flight search to find flights from Harrisburg to San Juan that fit within your specific budget. Explore options based on user searches and filter the results based on your desired price range. Find flights that match your budget for a cost-effective journey. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated December 9, 2025.
Use the filters below to find and compare flights from Harrisburg to San Juan that are best for you.

Fly from

Harrisburg

Fly to

San Juan

Route

Depart

Return

Price

HarrisburgSan Juan

MDT - SJU

MDTSJU

Harrisburg

Sun 1/11

5:30 pm-6:11 am

2 stops11h 41m

San Juan Luis Munoz Marin Intl

Tue 1/13

2:05 am-2:15 pm

2 stops13h 10m

$231

HarrisburgSan Juan

MDT - SJU

MDTSJU

Harrisburg

Sun 1/11

5:30 pm-6:11 am

2 stops11h 41m

San Juan Luis Munoz Marin Intl

Wed 1/14

2:05 am-2:15 pm

2 stops13h 10m

$254

HarrisburgSan Juan

MDT - SJU

MDTSJU

Harrisburg

Sun 1/25

7:50 pm-5:50 pm

2 stops21h 00m

San Juan Luis Munoz Marin Intl

Sat 1/31

6:00 am-7:30 pm

1 stop14h 30m

$318

HarrisburgSan Juan

MDT - SJU

MDTSJU

Harrisburg

Sat 3/7

6:52 pm-3:50 am

1 stop7h 58m

San Juan Luis Munoz Marin Intl

Sat 3/14

4:09 pm-5:52 pm

1 stop25h 43m

$320

HarrisburgSan Juan

MDT - SJU

MDTSJU

Harrisburg

Sun 1/25

6:30 am-9:26 pm

2 stops13h 56m

San Juan Luis Munoz Marin Intl

Fri 1/30

2:05 am-2:15 pm

2 stops13h 10m

$321

HarrisburgSan Juan

MDT - SJU

MDTSJU

Harrisburg

Mon 3/9

6:15 am-8:00 pm

2 stops13h 45m

San Juan Luis Munoz Marin Intl

Wed 3/11

1:05 am-1:51 pm

2 stops12h 46m

$323

HarrisburgSan Juan

MDT - SJU

MDTSJU

Harrisburg

Sun 1/11

10:42 am-11:56 pm

1 stop12h 14m

San Juan Luis Munoz Marin Intl

Thu 1/15

8:20 am-4:02 pm

1 stop8h 42m

$328

HarrisburgSan Juan

MDT - SJU

MDTSJU

Harrisburg

Sun 2/22

11:59 am-9:33 pm

2 stops8h 34m

San Juan Luis Munoz Marin Intl

Sat 2/28

6:00 am-7:27 pm

1 stop14h 27m

$328

HarrisburgSan Juan

MDT - SJU

MDTSJU

Harrisburg

Thu 2/26

4:57 pm-7:55 pm

2 stops25h 58m

San Juan Luis Munoz Marin Intl

Mon 3/9

8:37 pm-5:52 pm

1 stop21h 15m

$360

HarrisburgSan Juan

MDT - SJU

MDTSJU

Harrisburg

Sun 1/11

3:10 pm-6:11 am

2 stops14h 01m

$116

Flights are sorted by cheapest round-trip flights first.

Deals found on 12/7

Showing 1-10 of 18 results
1
2

Best time to book a flight from Harrisburg to San Juan

Have a flexible travel schedule? Discover the best time to fly to San Juan from Harrisburg with our price prediction graph.
Estimated round-trip price
Rates are based on past data. Find the cheapest month and day to book your flight based on your travel requirements, then search for cheap deals.

Cheapflights Insights

Everything you need to know about your flight from Harrisburg to San Juan

What is the cheapest month to book a flight from Harrisburg to San Juan?

Currently, January is the cheapest month in which you can book a flight from Harrisburg to San Juan (average of $113). Flying from Harrisburg to San Juan in December is currently the most expensive (average of $180). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

What is the cheapest time of day to fly from MDT to SJU?

Find hourly flight availability from Harrisburg to San Juan. Discover flight options and departure times throughout the day, allowing you to choose a departure time that suits your schedule. Data last updated December 9, 2025.

A simple way to save on the total cost of your ticket is to fly from Harrisburg to San Juan in the evening. If you’re flexible enough to do this you can expect to save up to 40% on your trip compared to booking a flight at noon.

Reviews of airlines servicing San Juan

Get insights into the airlines that provide service to San Juan. Read reviews, discover amenities, and learn about the overall travel experience offered by airlines. Use this information to make informed decisions when choosing an airline for your flight to San Juan. Reviews last updated December 9, 2025.
See what other customers who have flown with United Airlines, American Airlines, and Frontier from Harrisburg to San Juan have to say. You can also see how each airline compares in terms of entertainment options, comfort, food, crew/service, and boarding process.
United Airlines
7.4
Good
9,088 reviews

Boarding

7.7

Overall

7.4

Food

6.6

Entertainment

7.1

Crew

8.1

Comfort

7.3

Reviews

1 / 20
10.0
Excellent

Sunderesh,Dec 2025

AUS - EWR

Smooth flight from Austin to Newark. The crew was friendly.
United Airlines
7.4
Good
9,088 reviews
United Airlines
7.4
Good
9,088 reviews

Boarding

7.7

Overall

7.4

Food

6.6

Entertainment

7.1

Crew

8.1

Comfort

7.3

Reviews

1 / 20
10.0
Excellent

Sunderesh,Dec 2025

AUS - EWR

Smooth flight from Austin to Newark. The crew was friendly.
American Airlines
7.2
Good
11,043 reviews
United Airlines
7.4
Good
9,088 reviews

Boarding

7.7

Overall

7.4

Food

6.6

Entertainment

7.1

Crew

8.1

Comfort

7.3

Reviews

1 / 20
10.0
Excellent

Sunderesh,Dec 2025

AUS - EWR

Smooth flight from Austin to Newark. The crew was friendly.
Frontier
5.8
Fair
3,085 reviews
United Airlines
7.4
Good
9,088 reviews

Boarding

7.7

Overall

7.4

Food

6.6

Entertainment

7.1

Crew

8.1

Comfort

7.3

Reviews

1 / 20
10.0
Excellent

Sunderesh,Dec 2025

AUS - EWR

Smooth flight from Austin to Newark. The crew was friendly.

Related info for your journey

Find useful and relevant information for your journey from Harrisburg to San Juan. Access travel guides, tips, and recommendations to enhance your travel experience. Get information about local attractions, weather, transportation options, and more.

  • What airport do you fly from for flights from Harrisburg to San Juan?

    For a flight from Harrisburg to San Juan, you will be flying from Harrisburg. Harrisburg (MDT) is just 8.5 mi from the center of the city. Harrisburg is the only Harrisburg airport and it handles 0 outbound flights to San Juan per day. 3 airlines have flights to San Juan from Harrisburg on a regular basis.

  • How long is the flight from Harrisburg to San Juan?

    A quick flight from Harrisburg to San Juan can take about 11h 41m. United Airlines provides one of the quickest options available for as low as $231. There are 1633 mi between Harrisburg and San Juan.

  • What are the cheapest airlines flying from Harrisburg to San Juan round-trip?

    Currently priced at $155, Frontier will fly you from Harrisburg to San Juan and back. In addition to Frontier, many other airlines offer competitively priced options for your trip. Search Cheapflights for deals from American Airlines and United Airlines - these airlines can fly you to your destination from $301 and $341, respectively. Frontier is 71% cheaper than the average price of flights available within the next 90 days to this destination.

  • What are the cheapest airlines to fly from Harrisburg to San Juan one-way?

    The cheapest airline one-way is Frontier, with whom users have recently found tickets for as low as $68. However, be on the lookout for offers from American Airlines and United Airlines, as they are both options that can get you from Harrisburg to San Juan for a low price.

  • Can I find deals for flights from Harrisburg to San Juan that include hotel bookings?

    Yes. In addition to deals on Harrisburg to San Juan flights, Cheapflights offers vacation packages that include both flights and hotel.

  • How can I find direct flights from Harrisburg to San Juan?

    After entering your origin and destination, apply the non-stop filter on the search result page to find direct flights from Harrisburg to San Juan.

  • Can I find deals for business class flights from Harrisburg to San Juan?

    Yes. Cheapflights offers flight deals from Harrisburg to San Juan by cabin class. In addition to browsing deals, you can also filter by cabin class on the search results page after making a search.

  • What is the cheapest month to book a flight from Harrisburg to San Juan?

    Currently, January is the cheapest month in which you can book a flight from Harrisburg to San Juan (average of $113). Flying from Harrisburg to San Juan in December is currently the most expensive (average of $180). There are several factors that can impact the price of a flight, so comparing airlines, departure airports and flight times can provide users with more options.

See more FAQs

Browse thousands of different options on Cheapflights for your next trip

Toggle through the tabs below to find thousands of options on Cheapflights for your next trip.

Alternative routes for Harrisburg to San Juan

See prices for flight routes from nearby airports that may be better suited for you.
John F Kennedy Intl to Luis Munoz Marin Intl flights
Newark to Luis Munoz Marin Intl flights
LaGuardia to Luis Munoz Marin Intl flights
Dulles Intl to Luis Munoz Marin Intl flights
Philadelphia to Luis Munoz Marin Intl flights
Reagan-National to Luis Munoz Marin Intl flights
John F Kennedy Intl to Aguadilla flights
Newark to Aguadilla flights
Pittsburgh to Luis Munoz Marin Intl flights
John F Kennedy Intl to Ponce flights
LaGuardia to Ponce flights
LaGuardia to Aguadilla flights
Dulles Intl to Ponce flights
Philadelphia to Ponce flights
Harrisburg to Luis Munoz Marin Intl flights
Allentown to Luis Munoz Marin Intl flights
Newark to Ponce flights
Philadelphia to Aguadilla flights
John F Kennedy Intl to Vieques flights
Reagan-National to Aguadilla flights
Scranton to Luis Munoz Marin Intl flights
Newark to Vieques flights
John F Kennedy Intl to Culebra flights
Newark to Culebra flights
Pittsburgh to Aguadilla flights
Newark to Mayagüez flights
Erie to Luis Munoz Marin Intl flights
State College to Luis Munoz Marin Intl flights
Dulles Intl to Aguadilla flights
LaGuardia to Vieques flights
Reagan-National to Mayagüez flights
Reagan-National to Ponce flights
Dulles Intl to Culebra flights
John F Kennedy Intl to Mayagüez flights
Dulles Intl to Vieques flights
Philadelphia to Culebra flights
Philadelphia to Vieques flights
Philadelphia to Mayagüez flights
Reagan-National to Vieques flights
Pittsburgh to Culebra flights
Reagan-National to Culebra flights
Harrisburg to Aguadilla flights
Pittsburgh to Vieques flights
State College to Aguadilla flights

Top 3 airlines flying from Harrisburg to San Juan

Discover the top 3 airlines that operate flights from Harrisburg to San Juan. Compare their services, reliability, and customer satisfaction ratings to choose the airline that best suits your travel preferences and needs. Over the last 7 days, Cheapflights users made 2,558,603 searches. Data last updated December 9, 2025.
AirlineCheapestAverageFlexibilityOn-time
FrontierCheapest$155Average$332FlexibilityNo cancel feeOn-time62%
American AirlinesCheapest$301Average$570FlexibilityNo cancel feeOn-time71%
United AirlinesCheapest$341Average$570FlexibilityNo cancel feeOn-time69%

100% Free

Cheapflights is completely free to use, so you can start saving the moment you arrive.

Book with Flexibility

Our users can plan ahead with confidence and find flights with no change fees

Travel Smart

Millions of people come to us for their flight needs every year. We help make travel planning easy by providing useful insights and data-driven graphs that can inform your decisions.