Regardless of the time of day you decide to fly, the ticket price will remain around the same. Book flights from Missoula to Juneau as you normally would.
One of the carriers operating flights from Missoula Johnson-Bell Field to Juneau Intl that may be offering flexible change policies is Alaska Airlines. Our site will let you filter for all airlines offering greater flexibility due to COVID-19.
While on average a flight from Missoula to Juneau is generally $1,178, our data shows the cheapest flight currently is $491. When looking at the most popular route, (Missoula Johnson-Bell Field - Juneau Intl), you can expect to pay $560 for that flight.